Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq6 96.9 3e-15
seq8 89.7 4e-13
>seq6
Length=1682205
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | |||| ||||| ||||| ||||| || ||||| ||||| |
Sbjct 47342 CCACCTCTCAATCTTAAGACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCAGAA 47283
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| |||| |||| ||| || || || | || | ||| || ||||| ||
Sbjct 47282 AGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGA 47223
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| ||||| || || | | | | || || || ||| |
Sbjct 47222 ATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACT 47163
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179
|||| |||||||||||| || ||||| || ||||| || ||||||||||||
Sbjct 47162 TCCAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTG 47112
>seq8
Length=506948
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | |||| || | |||||| |||||||| ||||| ||||| |
Sbjct 222652 CCTCCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 222593
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| |||| |||| || || || ||| | || | ||| || ||||| ||
Sbjct 222592 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 222533
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| |||||| || || | | | | ||| ||| || ||| |
Sbjct 222532 ATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATAGTGTCAGAGGACTCAACT 222473
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| || ||||| ||||| || || ||||| || ||||||||
Sbjct 222472 TCGAGGGTGATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 222426
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | |||| || | |||||| |||||||| ||||| ||||| |
Sbjct 222424 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 222365
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| |||| | |||| || | || || || || |||| | ||| || ||||| ||
Sbjct 222364 AAGGTTCTGCCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 222305
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| |||||| || || | | | | ||| ||| || ||| |
Sbjct 222304 ATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATAGTGTCAGAGGACTCGACT 222245
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||||| ||||| || || || || ||||| || ||||||||
Sbjct 222244 TCAAGAGTAATAGTCTTACCAGTCAAGGTCTTGACGAAAATTTGCAT 222198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422259148537160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |