Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 6e-17
>seq3
Length=2759450
Score = 102 bits (112), Expect = 6e-17
Identities = 205/299 (69%), Gaps = 4/299 (1%)
Strand=Plus/Minus
Query 97230 CACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGAC 97289
||| || || || | || ||||| || || ||||| ||||| || || ||| | ||
Sbjct 1498215 CACGTAGAATTGGCAAAAAACATGGCATGGAGGCAAGGCCATCTTGCCAAAATC-AGGAG 1498157
Query 97290 A-TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTA 97348
||||| || |||| | |||||||||||| ||||||||| | || | || || |
Sbjct 1498156 GGTTCCACGCTGACATAATAATTCTTCTATCGTATGGGTTTGTCTTTAACTTTTTGATGA 1498097
Query 97349 TCTGCTTTAATTGATCAACGCCTTCTCCACCATAAT-TGTGCTTAAGACCTTGATATTCT 97407
| || || || || | |||| || ||||| |||| | |||| |||||||
Sbjct 1498096 CATCCTGCAACTGGTCGAATCCTTTACCGGTATAATCTGTGTCACAATCCTT-ATATTCT 1498038
Query 97408 GCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCA 97467
||||| ||||||||||||||||| |||||||| ||||| | || |||||| | |||
Sbjct 1498037 GCTCCGAAATGCCTCCATTGGAAGCCATAAACTGGTCCCAAATCGCCTTCTCTACGGTCA 1497978
Query 97468 CAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC 97526
|| || | ||| || || | | |||||| ||| | ||||| || | |||||
Sbjct 1497977 GTCAATCCCAACTTGTCCAAGAATTCACGAGATCCGTTTCCTTCCCAGATTTTTACACC 1497919
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 97009 GGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAA 97068
|||||| | | ||| ||| |||| ||||||| |||||||||| || || | || |||
Sbjct 1498493 GGGAAATTCTTAGGAATTCTTGTAAACTGCTCTTTGAGAGCATCTATATGGTCCAAATAC 1498434
Query 97069 ATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCG 97128
| || |||||||| || |||||||||||||| ||| | | | |||| | || ||
Sbjct 1498433 ACATGTGCATCTCCCAATGTGTGAATAAATTCACCACAATCCATATCAACAATGTGTGCA 1498374
Query 97129 ATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCA 97188
||||| || || |||| || |||||| ||||| || || |||| ||||| |||
Sbjct 1498373 ATCATCTTGGTCAAGAGAGCGTATGAAGCAATATTAAATGGAACACCTAAACCCATGTCA 1498314
Query 97189 GCTGATCTTTGATATAACTGACAGGAAAGCTTT 97221
|| | ||| || || ||| || | ||||
Sbjct 1498313 CAAGAACGTTGGTACAATAAACATGATAACTTT 1498281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346783957735700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |