Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq3 102 6e-17 >seq3 Length=2759450 Score = 102 bits (112), Expect = 6e-17 Identities = 205/299 (69%), Gaps = 4/299 (1%) Strand=Plus/Minus Query 97230 CACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGAC 97289 ||| || || || | || ||||| || || ||||| ||||| || || ||| | || Sbjct 1498215 CACGTAGAATTGGCAAAAAACATGGCATGGAGGCAAGGCCATCTTGCCAAAATC-AGGAG 1498157 Query 97290 A-TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTA 97348 ||||| || |||| | |||||||||||| ||||||||| | || | || || | Sbjct 1498156 GGTTCCACGCTGACATAATAATTCTTCTATCGTATGGGTTTGTCTTTAACTTTTTGATGA 1498097 Query 97349 TCTGCTTTAATTGATCAACGCCTTCTCCACCATAAT-TGTGCTTAAGACCTTGATATTCT 97407 | || || || || | |||| || ||||| |||| | |||| ||||||| Sbjct 1498096 CATCCTGCAACTGGTCGAATCCTTTACCGGTATAATCTGTGTCACAATCCTT-ATATTCT 1498038 Query 97408 GCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCA 97467 ||||| ||||||||||||||||| |||||||| ||||| | || |||||| | ||| Sbjct 1498037 GCTCCGAAATGCCTCCATTGGAAGCCATAAACTGGTCCCAAATCGCCTTCTCTACGGTCA 1497978 Query 97468 CAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC 97526 || || | ||| || || | | |||||| ||| | ||||| || | ||||| Sbjct 1497977 GTCAATCCCAACTTGTCCAAGAATTCACGAGATCCGTTTCCTTCCCAGATTTTTACACC 1497919 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 97009 GGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAA 97068 |||||| | | ||| ||| |||| ||||||| |||||||||| || || | || ||| Sbjct 1498493 GGGAAATTCTTAGGAATTCTTGTAAACTGCTCTTTGAGAGCATCTATATGGTCCAAATAC 1498434 Query 97069 ATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCG 97128 | || |||||||| || |||||||||||||| ||| | | | |||| | || || Sbjct 1498433 ACATGTGCATCTCCCAATGTGTGAATAAATTCACCACAATCCATATCAACAATGTGTGCA 1498374 Query 97129 ATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCA 97188 ||||| || || |||| || |||||| ||||| || || |||| ||||| ||| Sbjct 1498373 ATCATCTTGGTCAAGAGAGCGTATGAAGCAATATTAAATGGAACACCTAAACCCATGTCA 1498314 Query 97189 GCTGATCTTTGATATAACTGACAGGAAAGCTTT 97221 || | ||| || || ||| || | |||| Sbjct 1498313 CAAGAACGTTGGTACAATAAACATGATAACTTT 1498281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783957735700