Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq2 123 2e-23 >seq2 Length=3116340 Score = 123 bits (136), Expect = 2e-23 Identities = 542/851 (64%), Gaps = 15/851 (2%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || ||||| |||||||| || ||||| || || || || |||| || || || Sbjct 2726149 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTC 2726208 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAAT 16063 ||||| || || || || || | ||| || | | ||||| | | |||| Sbjct 2726209 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTGCCCAAAGCAATCAAT 2726268 Query 16064 AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 16123 ||||| || || || || || | || || ||| || || ||||||||||| ||| Sbjct 2726269 AATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAATAAG 2726328 Query 16124 TTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATA 16183 ||| || | || || || || || | || || || || || |||||| | || || Sbjct 2726329 GAAACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTAATGATC 2726388 Query 16184 TCTCTTACTACACTATTTAACGGAGG---GTTTAATAAGTGTTTAAACATTATACAAGCA 16240 | ||| | ||| || | || |||| ||||| |||| | ||| || Sbjct 2726389 T-TCTCA--ACAATAACTGGGTCTGGTCTGTTTTGCAAGTGAGAGAACAACAAACAGGCG 2726445 Query 16241 AAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGC 16300 || || || || |||||||| |||| || || ||||| || || || | ||||||| Sbjct 2726446 AAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCTGGC 2726505 Query 16301 ATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCT 16360 |||| |||| || || | ||| || |||| || || || ||| || || ||||| Sbjct 2726506 ATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAAAGATACCC 2726565 Query 16361 TCAACTGCGGCAAATGCAACCAATCGCTCACCGTAC---GTTCTAtttttactttctatc 16417 ||||| || || || || || |||| ||||||| || | | || | | ||| Sbjct 2726566 TCAACAGCAGCGAAAGCTACTAATCTCTCACCGAACAAGGCTTCATCGTCA---GAGATC 2726622 Query 16418 cattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAAT 16477 ||| | ||||| | || || | | | | ||| ||||| || || || || || Sbjct 2726623 CATCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTGTCGATGGCGTTGAAA 2726682 Query 16478 AAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCT 16537 | | | ||| || || || ||||| || |||| |||| || | || Sbjct 2726683 AGGAAGTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAATAAAGAGTATGTCTCA 2726742 Query 16538 GAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGT 16597 || ||||| || ||||| || || ||||| || || || | ||||| | ||||| Sbjct 2726743 GAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTGG 2726802 Query 16598 ACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAA 16657 ||||||| | || | || | ||||| ||||| || || ||||| || || || Sbjct 2726803 ACTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGGCGGCGAAG 2726862 Query 16658 AACGCAAGTATGTGTTTAATAAAAtttttttCGTT-ATCTGAAAGTTTT--AACCAGTCA 16714 || || | || | ||| || | | ||||||| | | || || | ||||||| Sbjct 2726863 AAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTCAACTTGTGGTTCCAGTCA 2726922 Query 16715 GAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTA 16774 | ||| || || |||| ||||| | ||||| || || || ||||||| || Sbjct 2726923 GTGGTATCCTTACTCAAGTCGATTTCTTCGGCGGTCCAGAAGGAGGCTTCAGCCTTCTTG 2726982 Query 16775 TACATTTTCCA 16785 ||||||| ||| Sbjct 2726983 TACATTTGCCA 2726993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511942186000