Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq3 120 2e-22 >seq3 Length=2759450 Score = 120 bits (132), Expect = 2e-22 Identities = 212/304 (70%), Gaps = 4/304 (1%) Strand=Plus/Plus Query 20140 GAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGA 20199 |||||||| || || || ||| | | | |||||| |||| || ||| ||| Sbjct 1497913 GAAAAAGGTGTAAAAATCTGGGAAGGAAACGGATCTCGTGAATTCTTGGACAAGTTGGGA 1497972 Query 20200 TTTGACA-ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTT 20258 || ||| ||||| ||| || |||||||| || || ||||| || |||||||| ||||| Sbjct 1497973 TT-GACTGACCGTAGAGAAGGCGATTTGGGACCAGTTTATGGCTTCCAATGGAGGCATTT 1498031 Query 20259 TGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACA 20318 ||||| |||||| || ||||| ||||| || ||||| | || || || || Sbjct 1498032 CGGAGCAGAATATAAGGATTGTGACACAGATTATACCGGTAAAGGATTCGACCAGTTGCA 1498091 Query 20319 AAATGTTATTAATTTAATTAAA-ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCT 20377 |||| || || | ||||| || |||||| |||| |||||||||||| | | || | Sbjct 1498092 GGATGTCATCAAAA-AGTTAAAGACAAACCCATACGATAGAAGAATTATTATGTCAGCGT 1498150 Query 20378 GGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTT 20437 ||||| || ||| | ||||| ||||||||||| ||| | | |||||||| | Sbjct 1498151 GGAACCCTCCTGATTTTGGCAAGATGGCCTTGCCTCCATGCCATGTTTTTTGCCAATTCT 1498210 Query 20438 ACGT 20441 |||| Sbjct 1498211 ACGT 1498214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183951349450