Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq2 134 1e-26 >seq2 Length=3116340 Score = 134 bits (148), Expect = 1e-26 Identities = 474/731 (65%), Gaps = 12/731 (2%) Strand=Plus/Plus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 ||||| || ||||| ||||| || || ||||||||||| ||||| | | || || || Sbjct 2726149 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTC 2726208 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 14031 ||||| || || ||||| || || ||| | | || || | || | | | | Sbjct 2726209 TCCATGAAGTCGAATGGGTTGGT-GACGTTGTAGACCTTCTTGTTGCCCAAAGCAATCAA 2726267 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 |||||| || |||| |||||| | |||||| |||| || || ||||| |||| || Sbjct 2726268 TAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAATAA 2726327 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 || || | || || || ||||||| || || ||||| || | || || Sbjct 2726328 GGAAACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTAATGAT 2726387 Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTA--AACACGCA 14209 || || ||| | | | | | |||| | || | || | |||| || Sbjct 2726388 CTTCTCAACAATAAC--TGGGTCTGGTCTGTTTTGCAAGTGAGAGAACAACAAACAGGCG 2726445 Query 14210 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 14269 || || || | || || ||||||| || | |||||| || || || || |||||| Sbjct 2726446 AAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCTGGC 2726505 Query 14270 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 14329 || || |||| || || ||||| || || | |||||| ||||| || || || ||| Sbjct 2726506 ATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAAAGATACCC 2726565 Query 14330 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCAT 14389 ||||| ||||| || |||| ||||| || || ||| | |||| | || || |||||| Sbjct 2726566 TCAACAGCAGCGAAAGCTACTAATCTCTCACCGAACAAGGCTTCATCGTCAGAGATCCAT 2726625 Query 14390 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT-TCAATAGCATTAAATAA 14448 | ||||| |||| || ||| | ||| | | | |||| || || || || || | Sbjct 2726626 CTCAAGGCCCAGTCAGCCTTCTTTCTGATACA-TGGAATGTTGTCGATGGCGTTGAAAAG 2726684 Query 14449 ATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 14506 || || |||| | ||| || ||| || ||||| | ||| || | ||| Sbjct 2726685 GAAGTCGGCTTCCTTAGGGTCCTT--AACGTAAGTGTCAATTAATAAAGAGTATGTCTCA 2726742 Query 14507 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14566 ||||| ||||||||||| || || ||||| || ||||| | ||||||| ||| Sbjct 2726743 GAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTGG 2726802 Query 14567 ACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14626 || || | | || | || |||| || || || || ||||||||| || || || Sbjct 2726803 ACTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGGCGGCGAAG 2726862 Query 14627 AATGCCAATAT 14637 || ||||| || Sbjct 2726863 AAAGCCAAGAT 2726873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345539706800