Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq8 113 3e-20 seq6 91.5 1e-13 >seq8 Length=506948 Score = 113 bits (124), Expect = 3e-20 Identities = 166/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 18091 TTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGT 18150 ||| || ||||| | | ||| | |||| |||||| || ||||| ||||| ||||||| Sbjct 222660 TTTATTGACCTCCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGT 222601 Query 18151 AGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGAT 18210 |||| | | ||| ||| ||||||||||| || || ||| |||| | ||||||||| | Sbjct 222600 AGTCAGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGT 222541 Query 18211 CCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGG 18270 | || | |||||||| || || | ||| || | ||| ||||||| || Sbjct 222540 CTGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATAGTGTCAGAGG 222481 Query 18271 GCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| ||| | |||||| | || |||||||| || || || ||||||||||| Sbjct 222480 ACTCAACTTCGAGGGTGATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 222426 Score = 107 bits (118), Expect = 1e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| |||||| || ||||| ||||| ||||||||||||| | ||| ||| |||||| Sbjct 221722 ACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCGTCTTCC 221663 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || || |||| | | |||||| || || | ||||||||||| Sbjct 221662 AATTGCTTACCAGCGAAGATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGG 221603 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||||| | || ||| | ||| ||| | || Sbjct 221602 ATCTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTCTTA 221543 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTTTA 18330 ||||||||||| || || || |||||||| |||| Sbjct 221542 CCGGTCAATGTCTTAACGAAGATTTGCATGTTTA 221509 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| | ||||| |||||| || ||||| ||||| ||||||||||| | | ||| | | Sbjct 222185 TCTTAATACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTGCC 222126 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 ||||||||||| || || ||| |||| | ||||||||| || || | |||||||| Sbjct 222125 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTT 222066 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || || | |||||| | ||| |||||| | || ||||| || || Sbjct 222065 GTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCAACTTCAAGAGTAAT 222006 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | || || ||||| || || || ||||||||||| Sbjct 222005 AGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221970 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| |||||| || ||||| ||||| ||||||||||||| | ||| ||| |||||| Sbjct 221950 ACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCGTCTTCC 221891 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || || |||| | | |||||| || || | |||||||| || Sbjct 221890 AATTGCTTACCAGCGAAGATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGG 221831 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| |||||| | ||| ||||| || || | || Sbjct 221830 ATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCGACTTCAAGAGTAATAGTCTTA 221771 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || ||||| || || || ||||||||||| Sbjct 221770 CCAGTCAAAGTCTTGACGAAAATTTGCAT 221742 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| |||||| || ||||| ||||| ||||||||||| | | ||| | | ||||| Sbjct 222406 ACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTGCCGTCTTCT 222347 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || || | || | ||||||||| || || | |||||||| || Sbjct 222346 AATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGG 222287 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | ||| || | ||| ||||||| || |||| ||||| || || | || Sbjct 222286 ATCTTGGACTTAACGTTGTCAATAGTGTCAGAGGACTCGACTTCAAGAGTAATAGTCTTA 222227 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || ||||| || || || ||||||||||| Sbjct 222226 CCAGTCAAGGTCTTGACGAAAATTTGCAT 222198 >seq6 Length=1682205 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/217 (70%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171 |||| |||| ||| | || ||||| || || ||||||||||| | | ||| ||| | Sbjct 47328 TAAG-ACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCGT 47270 Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231 ||||||| || || || || |||| | ||||||||| || || | |||||||| | Sbjct 47269 CTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGT 47210 Query 18232 CGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 | ||| | |||||| | ||| ||||| || |||| ||| | ||| ||| Sbjct 47209 CCTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGG 47150 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 | || || || || || || || |||||||||||||| Sbjct 47149 TCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 47113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343953767450