Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 7e-15 >seq3 Length=2759450 Score = 96.9 bits (106), Expect = 7e-15 Identities = 247/368 (67%), Gaps = 6/368 (2%) Strand=Plus/Plus Query 35234 ACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGC 35293 || |||||||| | || | ||||| || || | ||||||| |||||| | || Sbjct 1497829 ACCACCAAGAAGGTATTTTCACGAGGAATTATGCACGAACTCTTGTGGTTTGTTGCTGGA 1497888 Query 35294 AATACAGACGCCAAAGAATTG-GCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTC 35352 | ||||| |||||| |||| | || ||| | || | |||||| | | || || || Sbjct 1497889 AGCACAGATGCCAAATTATTGAGTGAAAAAGGTG-TAAAAATCTGGGAAGGAAACGGATC 1497947 Query 35353 GCGGGAATTTTTGGACA-GTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCG 35411 || ||||| ||||||| || | || || || | ||| || ||||||||||| | Sbjct 1497948 TCGTGAATTCTTGGACAAGTTG-GGATTGACTGACCGTAGAGAAGGCGATTTGGGACCAG 1498006 Query 35412 TATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATA 35471 | || || ||||||||| | ||||| || || |||||| | ||| | ||||||| Sbjct 1498007 TTTATGGCTTCCAATGGAGGCATTTCGGAGCAGAATATAAGGATTGTGACACAGATTATA 1498066 Query 35472 CTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGA-AAATCCAGAT 35530 | || || || | || || ||| || | | || | | | ||| ||| ||| | Sbjct 1498067 CCGGTAAAGGATTCGACCAGTTGCAGGATGTCATCAA-AAAGTTAAAGACAAACCCATAC 1498125 Query 35531 GATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCT 35590 |||||||| || |||||| | || ||||| ||| ||| || | ||||| | ||| Sbjct 1498126 GATAGAAGAATTATTATGTCAGCGTGGAACCCTCCTGATTTTGGCAAGATGGCCTTGCCT 1498185 Query 35591 CCATGCCA 35598 |||||||| Sbjct 1498186 CCATGCCA 1498193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583873209550