Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq2 219 5e-52
seq1 122 1e-22
>seq2
Length=3116340
Score = 219 bits (242), Expect = 5e-52
Identities = 589/888 (66%), Gaps = 26/888 (3%)
Strand=Plus/Plus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|||||||| |||| || | || ||||| || ||||| || || | || || || ||
Sbjct 2726149 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTC 2726208
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
|||||||| || || || ||||| || ||||| | || || ||||| || ||||
Sbjct 2726209 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTGCCCAA---AGCAATC 2726265
Query 33411 AAT---CTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATG 33467
||| || || || ||||| || | ||| ||||| ||| ||||||||||
Sbjct 2726266 AATAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAAT 2726325
Query 33468 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATA 33527
| |||||| | ||| |||| | |||||||| || || || || | || ||
Sbjct 2726326 AAGGAAACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTAATG 2726385
Query 33528 ATAAATCT-AACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGC 33586
|| ||| ||| | || ||| | | || || |||| |||||| ||
Sbjct 2726386 ATCT-TCTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGAGAGAACAACAAACAGGC 2726444
Query 33587 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGG 33646
||| ||| ||| | ||| |||||||||| || |||||||| || || || | || ||
Sbjct 2726445 GAAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCTGG 2726504
Query 33647 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCC 33706
||||| || | ||| || | ||| || || |||||||| ||||| || ||||| ||
Sbjct 2726505 CATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAAAGATACC 2726564
Query 33707 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT-----GTCATGTATC 33761
|| || ||||| || || | | |||||| || ||| | ||| |||| |||
Sbjct 2726565 CTCAACAGCAGCGAAAGCTACTAATCTCTCACCG-AACAAG-GCTTCATCGTCAGAGATC 2726622
Query 33762 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 33821
|| | ||||| || ||||||||| | | ||| || || | || ||||| || ||
Sbjct 2726623 CATCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTGTCGATGGCGTTGAAA 2726682
Query 33822 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA--AAGACTATACATTT 33879
|| ||| ||| ||| || ||||| ||||| || || || |||| ||| | |
Sbjct 2726683 AGGAAGTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAATAAAGAGTATG--TCT 2726740
Query 33880 CCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 33939
| || ||||||||||| || || || || ||||||||||| | || || | || |
Sbjct 2726741 CAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTT 2726800
Query 33940 GCACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCATCACTGGCTGC 33997
| ||||| | | | || ||||| | || || || || || || |||||| ||| ||
Sbjct 2726801 GGACTTCAGCAGAGAA--GTTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGGCGGC 2726858
Query 33998 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGTGTTAGT--TTATTCCA 34054
|| || ||||| | | | || || ||| ||||| ||| || | | | |||||
Sbjct 2726859 GAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTCAACTTGTGGTTCCA 2726918
Query 34055 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 34114
||| || |||| ||| | || | |||||| | ||||| || || || || |||||
Sbjct 2726919 GTCAGTGGTATCCTTACTCAAGTCGATTTCTTCGGCGGTCCAGAAGGAGGCTTCAGCCTT 2726978
Query 34115 TTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
|| ||||| | ||||| ||||| || | ||||||||| | ||| ||
Sbjct 2726979 CTTGTACATTTGCCAGACTTCATGGTACTTGATTGGGAAGAGAACGAA 2727026
Score = 185 bits (204), Expect = 1e-41
Identities = 562/866 (65%), Gaps = 2/866 (0%)
Strand=Plus/Plus
Query 63019 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63078
||||||| | || || || | ||| || |||| |||||||| || ||||| || | |
Sbjct 2774300 ACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCGTCCTTGTACAACA 2774359
Query 63079 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63138
|||| |||||||| || ||| |||| | || | ||| || | ||| | | | ||||
Sbjct 2774360 TGAAAGGAGTACCGGTCTCAGTCTGGGCCTCCAAAATGGCGTACCACAACTTTTGGGCCT 2774419
Query 63139 TTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGT 63198
| | | | | ||| | |||||| ||||| | ||||| |||||| ||||
Sbjct 2774420 TGACAGTGTTTCTTCCTCTACCTTCTCTCTCGTAACGTTCGTACAACTCTTCGAATTCGT 2774479
Query 63199 CTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63258
| || | || | ||| | ||| ||| | ||| | | | | ||| || ||||
Sbjct 2774480 CACCGTATACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCAATCACCGT 2774539
Query 63259 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTG 63318
| | |||| ||||| || | || |||||||| | |||| || | |||||| |
Sbjct 2774540 TTTGTTCGACTCTCTTCATGAACAAGTCTGGAATCCACAAAGCTGGGAACAAATCTCTAG 2774599
Query 63319 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63378
|||| || || || || |||||| | | ||| | ||| | | ||| || | |
Sbjct 2774600 CTCTAATCTCTTCCTTACCGTGGTTCTTTCTGATATCAATGAAGTCGAAAATGTCTGCGT 2774659
Query 63379 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63438
|||| ||||||||||||| ||| | | | || || || ||||| || || || || | ||
Sbjct 2774660 GCCATGGTTCCAAGTATAAGGCAAAAGCACCTGGACGCTTGTTACCACCTTGGTCAACGT 2774719
Query 63439 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63498
||||||| || ||||| | || | | ||||||||| |||||||| ||| |||| || |
Sbjct 2774720 ATCTAGCAGTATTATTGAAGACACGAACCATTGGAATGATACCGTTGGATGTACCGTTAG 2774779
Query 63499 TACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 63558
|||| | || ||| | ||| | | |||||| || || || ||| || || || |
Sbjct 2774780 TACCAGCAATGTAGGCACCAGTAGAACGAATGTTGTGGATGTGTAAACCAATACCACCAG 2774839
Query 63559 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCAT 63618
| | || || || || || || ||||| ||||| || || || || || || |
Sbjct 2774840 CACTCTTGGAAATCAAGGCACAGGTCTTTAAAGTGTCGTAAATTCCGTCAATAGAGTCGT 2774899
Query 63619 CGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATA 63678
| ||||| | || ||||| ||||||||| || | || || || || || |
Sbjct 2774900 CCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTACCAGCGTTGAACA 2774959
Query 63679 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTG 63738
| || |||||| |||| || || | || || | | ||||| | ||||| |
Sbjct 2774960 AAGTTGGAGAACCGTGAGTGAAGAAACGTTGGGACATCAAGTTGTAAGATTCAATGACCT 2775019
Query 63739 AGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 63797
|| ||||| || | || || || | | || | ||| | || || || ||||||
Sbjct 2775020 TCTCGATATCATCACCG-TGGATACCAATAGAAACTCTCATAATCAAATGTTGTGGTCTT 2775078
Query 63798 TCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 63857
||| ||| || ||| | || | ||| ||| | || || || || ||||||||
Sbjct 2775079 TCAGCAACCTTACCGTTGACACGTAAAAGGTATGATCTCTCTAAGGTCTTGAAACCAAAG 2775138
Query 63858 TAGTTGTATGAAAAGTCTCGTTCGTA 63883
||||| || ||||| || |||||
Sbjct 2775139 TAGTTATAATTGAAGTCACGATCGTA 2775164
>seq1
Length=3488706
Score = 122 bits (134), Expect = 1e-22
Identities = 328/497 (66%), Gaps = 5/497 (1%)
Strand=Plus/Minus
Query 62064 GATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAA 62123
||||| | || || || | ||||||||||| ||||| | || |||| |||||
Sbjct 3156320 GATGCAGCTTGTGTTCGCAAGTAGTACATTCCAGTTTTCAATCCCTTGTTCCAAGCGTAA 3156261
Query 62124 AAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGA 62183
||||| |||||| || || | | | || | | || || ||||||||| ||
Sbjct 3156260 AAATGACAACTCGTAAGCTTTCCAAACGTTGGGTTTTGTAAGTGAATATTCATACTCTGC 3156201
Query 62184 CTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATT 62243
|| || || || ||| || || || ||||| | | || |||||| | |||
Sbjct 3156200 AGCTGGTCAATAAACTTTCCTCTATCGGCCGCCATGTCGACAATGACCTTTTGCGAAATC 3156141
Query 62244 TCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTTTG-TAT--TCTGAAT 62299
||||| | ||||||||| || || ||| || || | ||| | |||| ||| |||||||
Sbjct 3156140 TCCCACACAGTTTTATACAAGTC-CTTTATCTCCTGTGGGATATTTGGTATGCTCTGAAT 3156082
Query 62300 GGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGT 62359
||||||| || | |||||| | ||| | ||| || ||||||| | ||| |
Sbjct 3156081 GGATCCATTTTCAAGAATAATCTTGTTCCTCATCGCAGACGTCCATAAACCTAAGTCGAT 3156022
Query 62360 TAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGT 62419
|||| | | | || | | || |||| ||||| |||||||| | ||||| | ||
Sbjct 3156021 TAAATCCTTCAATAGGTACTTATTTACTATCTGGAACTCTCCAGAAAGCACTCTTCTTGT 3155962
Query 62420 GTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGA 62479
|| | ||| |||||||| || | | |||||| || | ||| || | ||| ||
Sbjct 3155961 ATATAAATTGGAAGTATACGGCTCAAAGCATTCATTAAAGCCGAGAATCTGTGAAGTCGA 3155902
Query 62480 TGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATC 62539
|||||| ||||| |||||||| || || ||||| || || | | | ||| || ||
Sbjct 3155901 TGCAGTAGGCATCGGTGCCACTAACAAGGAGTTTCTGAGGCCATGTACTTTGACTTGATT 3155842
Query 62540 TTTTAGATGTTCCCAAT 62556
|||| | |||||||
Sbjct 3155841 CTTTAATTCATCCCAAT 3155825
Score = 107 bits (118), Expect = 2e-18
Identities = 220/327 (67%), Gaps = 0/327 (0%)
Strand=Plus/Minus
Query 63192 AACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCAC 63251
||||| ||||| || || |||||| ||| ||| || || | | || |||||
Sbjct 3155159 AACTCTTCTCCGTAACAATCTGCCAATCCTGGAGCTTCGTCTGGGGAAAATAAGGACCAA 3155100
Query 63252 TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 63311
|| | | | || || | | ||| || | ||| |||||||| ||| | | ||| | |
Sbjct 3155099 TCCTCATTGTTTTTGACCCTCTCCATGAATAAATCCGGAATCCATAGACCAAAAAACAAA 3155040
Query 63312 TCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 63371
|||| || || | ||||| || || ||||| || | ||| | || | | |
Sbjct 3155039 TCTCGCGTCCTGAGCTCCTCTTTGCCGTGGTTCTTCTTCAAATCCAAGATTTCAAAGACG 3154980
Query 63372 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGA 63431
||||||||||| || || || ||||| || | | |||| || | |||||| ||||| |||
Sbjct 3154979 TCAGAATGCCATGGCTCTAAATATATAGCAAAAGCTCCTGGTCTTTTGTTCCCTCCTTGA 3154920
Query 63432 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATA 63491
|| | |||||||| |||| |||| | ||| | | ||| || | | || | | | ||
Sbjct 3154919 TCCACATATCTAGCTGTGTCATTAAATACTTTAAGCATAGGCACCAACCCACTGGCTGTA 3154860
Query 63492 CCATTGGTACCGGAGATATAGCCTCCA 63518
|||||||||| || |||| | |||||
Sbjct 3154859 CCATTGGTACTGGCTATATGGGCTCCA 3154833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817521272800
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