Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq2 152 5e-32 >seq2 Length=3116340 Score = 152 bits (168), Expect = 5e-32 Identities = 478/731 (65%), Gaps = 12/731 (2%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || ||||| ||||| || || || |||||||| ||||| | | || || || Sbjct 2726149 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTC 2726208 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAA 13487 ||||| || |||||||| || || ||| | | || || | || | | | || Sbjct 2726209 TCCATGAAGTCGAATGGGTTGGT-GACGTTGTAGACCTTCTTGTTGCCCAAAGCAATCAA 2726267 Query 13488 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547 |||||| || |||| ||||| | |||||| |||| || || ||||| |||| || Sbjct 2726268 TAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAATAA 2726327 Query 13548 TTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 13607 || || | || ||| || ||||||| || || ||||| || | || || Sbjct 2726328 GGAAACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTAATGAT 2726387 Query 13608 AATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTA--AACACGCA 13665 ||| || ||| | | | | | |||| | || | || | |||| || Sbjct 2726388 CTTCTCAACAATAAC--TGGGTCTGGTCTGTTTTGCAAGTGAGAGAACAACAAACAGGCG 2726445 Query 13666 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13725 || || || | || || ||||||| || | |||||| || || || || |||||| Sbjct 2726446 AAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCTGGC 2726505 Query 13726 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 13785 || || |||| || || ||||| || || | |||||| ||||| || || || ||| Sbjct 2726506 ATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAAAGATACCC 2726565 Query 13786 TCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCAT 13845 ||||| ||||| || |||| || || || || ||| | |||| | || || |||||| Sbjct 2726566 TCAACAGCAGCGAAAGCTACTAATCTCTCACCGAACAAGGCTTCATCGTCAGAGATCCAT 2726625 Query 13846 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT-TCGATTGCATTGAATAA 13904 | ||||| |||| || ||| | ||| | | | |||| ||||| || ||||| | Sbjct 2726626 CTCAAGGCCCAGTCAGCCTTCTTTCTGATACA-TGGAATGTTGTCGATGGCGTTGAAAAG 2726684 Query 13905 ATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 13962 || || |||| | ||| || ||| || ||||| | ||| || | ||| Sbjct 2726685 GAAGTCGGCTTCCTTAGGGTCCTT--AACGTAAGTGTCAATTAATAAAGAGTATGTCTCA 2726742 Query 13963 GAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14022 ||||| |||||||| || || || ||||| || ||||| | ||||||| ||| Sbjct 2726743 GAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTGG 2726802 Query 14023 ACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAA 14082 || || | | || | || ||||||| || || |||||||||||| || || || Sbjct 2726803 ACTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGGCGGCGAAG 2726862 Query 14083 AATGCCAATAT 14093 || ||||| || Sbjct 2726863 AAAGCCAAGAT 2726873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588740176400