Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq2 221 2e-52 seq1 123 3e-23 >seq2 Length=3116340 Score = 221 bits (244), Expect = 2e-52 Identities = 591/890 (66%), Gaps = 30/890 (3%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| |||| || | || ||||| || |||||||| || | || || || || Sbjct 2726149 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTC 2726208 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 |||||||| || || || ||||| || || || | || || ||||| || |||| Sbjct 2726209 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTGCCCAA---AGCAATC 2726265 Query 41894 AAT---CTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-T 41949 ||| || || || | ||| || | ||| ||||| ||| |||||||||| | Sbjct 2726266 AATAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAAT 2726325 Query 41950 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 42009 ||| |||||| | ||| |||| | |||||||| || || ||| || || || || Sbjct 2726326 AAGGA-AACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTAAT 2726384 Query 42010 AATAGATCTTACTGTTTCTTCACTCGGTGGATACAAT-----AAATGTTTAAACATCAAA 42064 |||||| || | ||| ||| | | || || |||| |||| Sbjct 2726385 ----GATCTT-CTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGAGAGAACAACAAA 2726439 Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || ||||| ||| ||| | ||| || ||||||| || ||||||||||| || || | Sbjct 2726440 CAGGCGAAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAA 2726499 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||||| || | ||| || | ||| || ||||| || || |||||| || ||| Sbjct 2726500 CCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAAAG 2726559 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAA-CCGGCACTGTCATGT 42241 || || || || || || || || | | |||||| || | || | || |||| Sbjct 2726560 ATACCCTCAACAGCAGCGAAAGCTACTAATCTCTCACCGAACAAGGCTTCATCGTCAGAG 2726619 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301 ||||| | ||||| || ||||||||| | | ||| || || | || ||||| || Sbjct 2726620 ATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTGTCGATGGCGTTG 2726679 Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCA--AAAGACTATACA 42359 || || ||| ||| ||| || ||||| || || || || | ||||| ||| Sbjct 2726680 AAAAGGAAGTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAATAAAGAGTAT--G 2726737 Query 42360 TTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAA 42419 | || || ||||||||||| || || || || ||||||||||| |||| || | | Sbjct 2726738 TCTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGGA 2726797 Query 42420 CCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTG 42479 || ||||| | | | || ||| | || || ||||| || || || ||| ||| | Sbjct 2726798 TTTGGACTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGGCGG 2726857 Query 42480 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTT-AATTT---ATTC 42535 | || || ||||| | | | || || ||| |||||| | |||| || || ||| Sbjct 2726858 CGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTC-TTGTTCAACTTGTGGTTC 2726916 Query 42536 CAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCC 42595 || ||| || |||| ||| | || | |||||| | ||||| || || ||||| ||| Sbjct 2726917 CAGTCAGTGGTATCCTTACTCAAGTCGATTTCTTCGGCGGTCCAGAAGGAGGCTTCAGCC 2726976 Query 42596 TTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 || || ||||| | ||||| ||||| || | |||||||| | ||| || Sbjct 2726977 TTCTTGTACATTTGCCAGACTTCATGGTACTTGATTGGGAAGAGAACGAA 2727026 Score = 183 bits (202), Expect = 4e-41 Identities = 564/867 (65%), Gaps = 4/867 (0%) Strand=Plus/Plus Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833 ||||||| | || || || | ||| || |||| |||||||| || ||||| || | | Sbjct 2774300 ACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCGTCCTTGTACAACA 2774359 Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 71893 | || |||||||| || ||| |||| | || | ||| || | ||| | | | |||| Sbjct 2774360 TGAAAGGAGTACCGGTCTCAGTCTGGGCCTCCAAAATGGCGTACCACAACTTTTGGGCCT 2774419 Query 71894 TTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGT 71953 | | | || | ||| |||||| ||||| || || || |||||| |||| Sbjct 2774420 TGACAGTGTTTCTTCCTCTACCTTCTCTCTCGTAACGTTCGTACAACTCTTCGAATTCGT 2774479 Query 71954 CTCCCCAAGCAT-TGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCA 72012 | || | | | || | || || ||| ||| || ||| | | | | ||| || || Sbjct 2774480 CACCGTATACTTCTGGC-AAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCAATCACCG 2774538 Query 72013 TCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 72072 | | | |||| ||||| || | || |||||||| | |||| || | |||||| Sbjct 2774539 TTTTGTTCGACTCTCTTCATGAACAAGTCTGGAATCCACAAAGCTGGGAACAAATCTCTA 2774598 Query 72073 GTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 72132 | |||| ||| || || || |||||| | | ||| | ||| | | ||| || | Sbjct 2774599 GCTCTAATCTCTTCCTTACCGTGGTTCTTTCTGATATCAATGAAGTCGAAAATGTCTGCG 2774658 Query 72133 TGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATG 72192 ||||| ||||||||||||| ||| | | | || || || ||||| || || || || | | Sbjct 2774659 TGCCATGGTTCCAAGTATAAGGCAAAAGCACCTGGACGCTTGTTACCACCTTGGTCAACG 2774718 Query 72193 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTG 72252 |||||||| || ||||| | || | | ||||||||| ||||| ||||||| ||| || Sbjct 2774719 TATCTAGCAGTATTATTGAAGACACGAACCATTGGAATGATACCGTTGGATGTACCGTTA 2774778 Query 72253 GTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCT 72312 || || | || ||| ||| | | |||||| ||| || || ||| || || || Sbjct 2774779 GTACCAGCAATGTAGGCACCAGTAGAACGAATGTTGTGGATGTGTAAACCAATACCACCA 2774838 Query 72313 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 72372 || | || || || || || || ||||| || || || || || || ||| || Sbjct 2774839 GCACTCTTGGAAATCAAGGCACAGGTCTTTAAAGTGTCGTAAATTCCGTCAATAGAGTCG 2774898 Query 72373 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 72432 ||| ||||| | || ||||| ||||||||| || || || || || || Sbjct 2774899 TCCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTACCAGCGTTGAAC 2774958 Query 72433 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCT 72492 || || |||||| |||| || || | || |||| | ||||| | ||||| | Sbjct 2774959 AAAGTTGGAGAACCGTGAGTGAAGAAACGTTGGGACATCAAGTTGTAAGATTCAATGACC 2775018 Query 72493 GATTCTATATC-CCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCT 72551 || ||||| || | || || || | | || | ||| | || ||| || ||||| Sbjct 2775019 TTCTCGATATCATCACCG-TGGATACCAATAGAAACTCTCATAATCAAATGTTGTGGTCT 2775077 Query 72552 TTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 72611 |||| | | ||| || | || | ||| ||| | || || || || |||||||| Sbjct 2775078 TTCAGCAACCTTACCGTTGACACGTAAAAGGTATGATCTCTCTAAGGTCTTGAAACCAAA 2775137 Query 72612 ATAGTTGTATGAAAAGTCTCGTTCGTA 72638 ||||| || ||||| || ||||| Sbjct 2775138 GTAGTTATAATTGAAGTCACGATCGTA 2775164 >seq1 Length=3488706 Score = 123 bits (136), Expect = 3e-23 Identities = 308/464 (66%), Gaps = 4/464 (1%) Strand=Plus/Minus Query 71812 TTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATC 71871 ||||| ||||| || || | ||| | || |||||||| |||| || || | || Sbjct 3155294 TTACAAGCATCTTTGTATAACATATATGGCCCCCCAGTTTCTGTCTGGGACTCCAAGATA 3155235 Query 71872 GCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTC--GTATT 71929 || | ||| | | |||| |||| | ||| || | ||||| ||||||| ||||| Sbjct 3155234 GCATGCCACAACTTTTGAGCTTTTACGAC-TTCATG-AGCTCTTCCCTCTTTCTCGTATT 3155177 Query 71930 GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCG 71989 | |||| | | ||||| ||||| || || | ||||| ||| ||| | | Sbjct 3155176 TCTTGTATAGTTCAACAAACTCTTCTCCGTAACAATCTGCCAATCCTGGAGCTTCGTCTG 3155117 Query 71990 GACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCC 72049 | | | || ||||| || ||| | || || | | ||| || | ||| ||||||| Sbjct 3155116 GGGAAAATAAGGACCAATCCTCATTGTTTTTGACCCTCTCCATGAATAAATCCGGAATCC 3155057 Query 72050 AAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGAT 72109 | ||| | | ||| | ||||| || || ||||||| || || ||||| || | || Sbjct 3155056 ATAGACCAAAAAACAAATCTCGCGTCCTGAGCTCCTCTTTGCCGTGGTTCTTCTTCAAAT 3154997 Query 72110 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCC 72169 | | || | | | ||||||||||| || || || ||||| || | | |||| || | Sbjct 3154996 CCAAGATTTCAAAGACGTCAGAATGCCATGGCTCTAAATATATAGCAAAAGCTCCTGGTC 3154937 Query 72170 GTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 72229 |||||| ||||| ||||| | |||||||| |||| |||| | ||| | | ||| || | Sbjct 3154936 TTTTGTTCCCTCCTTGATCCACATATCTAGCTGTGTCATTAAATACTTTAAGCATAGGCA 3154877 Query 72230 TAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273 | ||| ||| || ||||||||| | || |||| | |||| Sbjct 3154876 CCAACCCACTGGCTGTACCATTGGTACTGGCTATATGGGCTCCA 3154833 Score = 123 bits (136), Expect = 3e-23 Identities = 336/507 (66%), Gaps = 7/507 (1%) Strand=Plus/Minus Query 70779 TTTTATTTTTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAG 70838 ||| || | ||| |||| | |||||||| |||| ||||| |||| || || | Sbjct 3156360 TTTGATCTCTTCAGTGTCAACAGTAAACTGGATGGCTCTTGATGCAGCTTGTGTTCGCAA 3156301 Query 70839 ATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAG-TT 70897 |||||||| || ||||| | || |||| |||||||||| |||||| || || Sbjct 3156300 GTAGTACATTCCAGTTTTCAATCCCTTGTTCCAAGCGTAAAAATGACAACTCGTAAGCTT 3156241 Query 70898 TGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTC 70957 | || | | || | | || |||||||||||| ||| || || || || || Sbjct 3156240 TCCAAACGTTGGGTTTTG-TAAGTGAATATTCATACTCTGCAGCTGGTCAATAAACTTTC 3156182 Query 70958 CCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-A 71016 | || || || ||||| | | || |||||| | ||| ||||| | ||||||||| | Sbjct 3156181 CTCTATCGGCCGCCATGTCGACAATGACCTTTTGCGAAATCTCCCACACAGTTTTATACA 3156122 Query 71017 ACTCGCTTAATATCTTCTGGAAGGTTT-GTAT--TCTGAATGGATCCACCATCTGCAATA 71073 | || ||| || || | ||| | ||| |||| |||||||||||||| || |||| Sbjct 3156121 AGTC-CTTTATCTCCTGTGGGATATTTGGTATGCTCTGAATGGATCCATTTTCAAGAATA 3156063 Query 71074 ATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGA 71133 ||| | || | ||| | ||||||| | ||| ||||| | | | || | Sbjct 3156062 ATCTTGTTCCTCATCGCAGACGTCCATAAACCTAAGTCGATTAAATCCTTCAATAGGTAC 3156003 Query 71134 GGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATAC 71193 ||| |||| || || |||||||| | ||||| | || || | ||| |||||| Sbjct 3156002 TTATTTACTATCTGGAACTCTCCAGAAAGCACTCTTCTTGTATATAAATTGGAAGTATAC 3155943 Query 71194 GGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCC 71253 || || | | |||||| || | ||| || | ||| |||||||| ||||| |||||| Sbjct 3155942 GGCTCAAAGCATTCATTAAAGCCGAGAATCTGTGAAGTCGATGCAGTAGGCATCGGTGCC 3155883 Query 71254 ACCAATAGACTATTTCTAAGACCATGT 71280 || || | ||||| || |||||| Sbjct 3155882 ACTAACAAGGAGTTTCTGAGGCCATGT 3155856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139116107600