Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 122 1e-23 >seq1 Length=3488706 Score = 122 bits (134), Expect = 1e-23 Identities = 179/252 (71%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||| ||||||||||| || ||||||||||||||| | | ||||| | Sbjct 2308323 AGATCT-TAAGAGACAACATCCAAGGTATTACCAAGCCAGCTATCAGAAGATTGGCTAGA 2308265 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || |||||| | |||| ||| |||| ||||| | | | || |||||| Sbjct 2308264 AGAGGTGGTGTTAAGCGTATTTCTGCTTTGATCTACGAAGAAGTCAGAGTCGTCTTGAAG 2308205 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 ||| | ||| ||||||| ||||| | || |||||||||||||| | ||| Sbjct 2308204 TCATTCTTGGAGAACGTTATCAGAGATGCCGTTACTTACACCGAGCACGCTAAGAGAAAG 2308145 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 || ||||| || |||| | ||||| || ||||| | ||||| | | | |||||| Sbjct 2308144 ACCGTCACTTCTTTGGACGTTGTCTACGCCTTGAAGAGACAAGGTAGAACCTTGTATGGT 2308085 Query 16688 TTTGGAAGTTAA 16699 || || ||||| Sbjct 2308084 TTCGGTGGTTAA 2308073 Score = 113 bits (124), Expect = 7e-21 Identities = 177/252 (70%), Gaps = 1/252 (0%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||| ||||||||||| ||||| |||||||||||| | | |||| | Sbjct 2774183 AGATCT-TGAGAGACAACATCCAAGGTATCACTAAGCCAGCTATCAGAAGATTGGCCAGA 2774241 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || |||||| | || | || |||| ||||| | | | ||| |||||| Sbjct 2774242 AGAGGTGGTGTTAAGCGTATTTCCGCTTTAATCTACGAAGAAGTCAGAGTTGTCTTGAAG 2774301 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 |||| | ||| ||||||| |||||| || ||| || ||||||||||| | ||| Sbjct 2774302 TCCTTCTTGGAGAACGTTATCAGAGATGCTGTCACCTACACTGAGCACGCTAAGAGAAAG 2774361 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 || ||||| || | || | || || || ||||| | ||||| | | | || ||| Sbjct 2774362 ACCGTCACTTCTTTAGACGTTGTTTACGCCTTGAAGAGACAAGGAAGAACCTTGTACGGT 2774421 Query 16688 TTTGGAAGTTAA 16699 || || ||||| Sbjct 2774422 TTCGGTGGTTAA 2774433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075190856930