Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq6 123 2e-23 seq8 122 7e-23 >seq6 Length=1682205 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 |||||||||| | || || || || |||||||| || | |||||| | ||||||||| | Sbjct 47112 CAAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTGGAAGTCGAGTC 47171 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | ||||||||| || | ||||| |||||| ||||| ||||| || || || || Sbjct 47172 CTCCGACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATTCCACCTGA 47231 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||| ||| |||| | || || ||||| | ||||| | |||| | || || Sbjct 47232 CCAACAAAGATTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACTCTTTCTGACTA 47291 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || || ||||| || | || || || |||||||||||||| || Sbjct 47292 CAACATCCAGAAGGAATCCACCTTGCACTTGGTCTTAAGATTGAGAGGTGG 47342 >seq8 Length=506948 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| || | ||||| | ||||||||| || Sbjct 222198 ATGCAAATTTTCGTCAAGACCTTGACTGGTAAGACTATTACTCTTGAAGTCGAGTCCTCT 222257 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || || ||||| ||||| ||||| || || || || ||| Sbjct 222258 GACACTATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222317 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||||| || ||| |||||| | ||||| | ||||| | | || || ||| Sbjct 222318 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGCAGAACCTTATCTGACTACAAC 222377 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| ||||| || |||| || || |||||||||||||| || Sbjct 222378 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 222424 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| || | ||||| | ||||| || | Sbjct 221970 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTTGAATCTTCT 222029 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||| ||||| ||||| || || || || ||| Sbjct 222030 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222089 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | | || |||||| | ||||| | ||||| | | || || ||| Sbjct 222090 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACCTTATCTGACTACAAC 222149 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| ||||| || |||| || || |||||||||||||| || Sbjct 222150 ATCCAAAAGGAATCCACTCTTCACTTGGTATTAAGATTGAGAGGTGG 222196 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || || || || | || ||| ||||||| ||| || Sbjct 222426 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATCACCCTCGAAGTTGAGTCCTCT 222485 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || || ||||| ||||| ||||| || || || || ||| Sbjct 222486 GACACTATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222545 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | | || |||||| | ||||| | |||| | || || ||| Sbjct 222546 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 222605 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 || ||||| ||||| || |||| || || || |||||||||||||| | |||| Sbjct 222606 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGAGGTCAATAA 222659 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| || | ||||| | |||||||| | Sbjct 221742 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTCGAATCTTCT 221801 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||| ||||| ||||| || || || || ||| Sbjct 221802 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 221861 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | | || | || || |||||| | ||||| | |||| | ||| || ||| Sbjct 221862 CAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCCGACTACAAC 221921 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| ||||| || |||| || || |||||||||||||| || Sbjct 221922 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 221968 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || |||||| | || || || ||||| || || || | |||||| | ||||| || | Sbjct 221511 AACATGCAAATCTTCGTTAAGACATTGACCGGTAAGACCATTACCTTGGAAGTTGAATCT 221570 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 ||||| || || | ||||| ||||| || || ||||| || || || || Sbjct 221571 TCTGACACTATTGACAACGTCAAGTCCAAGATCCAAGATAAGGAAGGTATTCCACCAGAC 221630 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 ||||| | | || | || || |||||| | ||||| | |||| | ||| || Sbjct 221631 CAACAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCCGACTAC 221690 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| ||||| || |||| || || |||||||||||||| || Sbjct 221691 AACATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 221740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935947601550