Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2 181 1e-40 >seq2 Length=3116340 Score = 181 bits (200), Expect = 1e-40 Identities = 508/771 (66%), Gaps = 13/771 (2%) Strand=Plus/Plus Query 92917 CAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG 92976 ||||||||| || || || || || | ||| ||| ||||||| || |||||||||| Sbjct 2726265 CAATAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAA 2726324 Query 92977 AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAA 93036 | || || | ||| || || ||||| |||| |||||| || ||||| | | Sbjct 2726325 TAAGGAAACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTAAT 2726384 Query 93037 GAT-TTCTATTACTCTA-CTA--TTTGGTGGTTTTTGTACGACATAATTGTACATTAAGC 93092 ||| |||| || || || | |||| ||||| | | | | | ||| || | Sbjct 2726385 GATCTTCTCA-ACAATAACTGGGTCTGGTCTGTTTTGCAAGTGAGA---GAACAACAAAC 2726440 Query 93093 ACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAAC 93152 | || |||||||| |||||||||||||||| | ||||| || ||| ||| || |||| Sbjct 2726441 AGGCGAAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAAC 2726500 Query 93153 CTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTA 93212 |||| | | |||| ||||| | ||| || || ||||| || ||| ||||| | Sbjct 2726501 CTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAAAGA 2726560 Query 93213 TACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGA 93272 |||| || || || || || || || | | || | || || || || Sbjct 2726561 TACCCTCAACAGCAGCGAAAGCTACTAATCTCTCACCGAACAAGGCTTCATCGTCAGAGA 2726620 Query 93273 TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGCGTTA 93331 ||||| | || ||||| || || || || | ||||| || | |||| ||||| ||||| Sbjct 2726621 TCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAA-TGTTGTCGATGGCGTTG 2726679 Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391 || ||| | || || | | || | ||| || || ||||| | ||| || | Sbjct 2726680 AAAAGGAAGTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAATAAAGAGTATGTC 2726739 Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451 ||||| || | || ||||| ||||||||| ||||||||||| | ||||| | ||| Sbjct 2726740 TCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATT 2726799 Query 93452 TGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCa 93511 || ||||| ||| || |||| || | || || ||||| |||||||| || || || Sbjct 2726800 TGGACTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGGCGGCG 2726859 Query 93512 aaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTT---ATCCCAA 93568 || |||||||| ||| | || || | | | || | | || | ||| | ||| Sbjct 2726860 AAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTCAACTTGTGGTTCCAG 2726919 Query 93569 TCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTT 93628 || | ||| || | |||| ||||||| | ||||| || || ||||| || || Sbjct 2726920 TCAGTGGTATCCTTACTCAAGTCGATTTCTTCGGCGGTCCAGAAGGAGGCTTCAGCCTTC 2726979 Query 93629 TTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGA 93679 |||||||| | ||| | || || || | ||||| || | || |||||| Sbjct 2726980 TTGTACATTTGCCAGACTTCATGGTACTTGATTGGGAAGAGAACGAAACGA 2727030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860730392400