Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq8 136 3e-27 seq6 123 2e-23 >seq8 Length=506948 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || ||||| || ||||| || | ||||||||||| ||| | | Sbjct 221742 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTCGAATCTTCT 221801 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || ||||||||||| ||||||||||| || ||| Sbjct 221802 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 221861 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || || || || || || || || | || | ||||| |||||| Sbjct 221862 CAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCCGACTACAAC 221921 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| |||||||| | || || ||||| ||||| | || ||| Sbjct 221922 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGGT 221969 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || ||||| || ||||| || | ||||||||||| ||| | | Sbjct 221970 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTTGAATCTTCT 222029 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || ||||||||||| ||||||||||| || ||| Sbjct 222030 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222089 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || || || || || || | | ||| | || || |||||| Sbjct 222090 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACCTTATCTGACTACAAC 222149 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| |||||||| | || || || || ||||| | || ||| Sbjct 222150 ATCCAAAAGGAATCCACTCTTCACTTGGTATTAAGATTGAGAGGTGGT 222197 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || || || ||||| || | ||||||||||| || || | Sbjct 222198 ATGCAAATTTTCGTCAAGACCTTGACTGGTAAGACTATTACTCTTGAAGTCGAGTCCTCT 222257 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || ||||||||||| ||||||||||| || ||| Sbjct 222258 GACACTATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222317 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || ||||| || || ||||| || | | ||| | || || |||||| Sbjct 222318 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGCAGAACCTTATCTGACTACAAC 222377 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| |||||||| | || || ||||| ||||| | || ||| Sbjct 222378 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGGT 222425 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || ||||| |||||||| || |||| || ||||| || || | Sbjct 222426 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATCACCCTCGAAGTTGAGTCCTCT 222485 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || ||||||||||| ||||||||||| || ||| Sbjct 222486 GACACTATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222545 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || || || || || || | || | || || |||||| Sbjct 222546 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 222605 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| |||||||| | || || |||||| ||||| | |||||| Sbjct 222606 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGAGGT 222653 Score = 118 bits (130), Expect = 9e-22 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 |||| |||||||| || ||||| || || |||||||| || | || | ||||| ||| Sbjct 221509 TAAACATGCAAATCTTCGTTAAGACATTGACCGGTAAGACCATTACCTTGGAAGTTGAAT 221568 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | | || || | ||| | |||| || || ||||| ||||| ||||||||||| | Sbjct 221569 CTTCTGACACTATTGACAACGTCAAGTCCAAGATCCAAGATAAGGAAGGTATTCCACCAG 221628 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 | ||||||||| | || || || || || || || || || | || | ||||| | Sbjct 221629 ACCAACAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCCGACT 221688 Query 22394 ACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||| ||||| |||||||| | || || ||||| ||||| | || ||| Sbjct 221689 ACAACATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGGT 221741 >seq6 Length=1682205 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||||||||| || || |||||||| ||||| || | || | ||||| || || Sbjct 47113 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTGGAAGTCGAGTCC 47172 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| || |||| || ||||| |||||||| ||||||||||| || Sbjct 47173 TCCGACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATTCCACCTGAC 47232 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | | || || || || || ||||| || || | || | || || ||| Sbjct 47233 CAACAAAGATTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACTCTTTCTGACTAC 47292 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || ||||||||| | || || || || ||||| | || ||| Sbjct 47293 AACATCCAGAAGGAATCCACCTTGCACTTGGTCTTAAGATTGAGAGGTGGT 47343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727948845650