Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq6 183 6e-41
seq8 176 8e-39
>seq6
Length=1682205
Score = 183 bits (202), Expect = 6e-41
Identities = 170/216 (79%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| |||||||| | ||||| || || |||||||| || || || || || || || |||
Sbjct 47327 AAGACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCT 47268
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| |||||||| || ||||| || | |||||||||||| |||||||| |||||||||||
Sbjct 47267 TCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCC 47208
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|||||||| | |||||| || |||||||| | || || ||||||||||| |||||
Sbjct 47207 TGAATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTC 47148
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || || | ||||||||||| || |||||| ||
Sbjct 47147 TTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTG 47112
>seq8
Length=506948
Score = 176 bits (194), Expect = 8e-39
Identities = 174/224 (78%), Gaps = 2/224 (1%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| |||||||| || ||||| || ||||||||||| || ||||| || || || || |||
Sbjct 221725 AAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCGTCT 221666
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| || ||||| || ||||| || | | ||||||||| |||||||| |||||||| |||
Sbjct 221665 TCCAATTGCTTACCAGCGAAGATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTATCT 221606
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| ||||| | ||||||| || || ||||| | ||||| ||||||||||| |||||
Sbjct 221605 TGGATCTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTC 221546
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTATA 68473
|| || || | ||||| ||||| || ||||| | |||||||
Sbjct 221545 TTACCGGTCAATGTCTTAACGAAGATTTGCATGTT--TATTATA 221504
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| |||||||| || ||||| || ||||||||||| || ||||| || || || || |||
Sbjct 221953 AAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCGTCT 221894
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| || ||||| || ||||| || | | ||||||||| |||||||| ||||||||||||
Sbjct 221893 TCCAATTGCTTACCAGCGAAGATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTGTCT 221834
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| ||||| | ||||||| || |||||||| | ||||| ||||| | || || ||
Sbjct 221833 TGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCGACTTCAAGAGTAATAGTC 221774
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || |||||
Sbjct 221773 TTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221742
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
||||||||||| || ||||| || ||||||||||| || || || | || || || |||
Sbjct 222181 AATACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTGCCGTCT 222122
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| || ||||| || || || || | |||||||||||| |||||||| ||||||||||||
Sbjct 222121 TCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCT 222062
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| ||||| | ||||||| || |||||||| | ||||| ||||| | || || ||
Sbjct 222061 TGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCAACTTCAAGAGTAATAGTC 222002
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || |||||
Sbjct 222001 TTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221970
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| |||||||| || ||||| || ||||||||||| || || || | || || || |||
Sbjct 222409 AAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTGCCGTCT 222350
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
||||| ||||| |||||||| || | |||||||||||| |||||||| ||||||||||||
Sbjct 222349 TCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCT 222290
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| ||||| | ||| ||| || || ||||| | || || ||||| | || || ||
Sbjct 222289 TGGATCTTGGACTTAACGTTGTCAATAGTGTCAGAGGACTCGACTTCAAGAGTAATAGTC 222230
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | |||||||||||| || |||||
Sbjct 222229 TTACCAGTCAAGGTCTTGACGAAAATTTGCAT 222198
Score = 168 bits (186), Expect = 1e-36
Identities = 165/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || ||||| || ||||||||||| || || || || || || || ||
Sbjct 222638 CAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTC 222579
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| |||||||| |||||||||||
Sbjct 222578 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 222519
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | ||| ||| || || ||||| | || || ||||| | |||||| ||
Sbjct 222518 TTGGATCTTGGACTTAACGTTGTCAATAGTGTCAGAGGACTCAACTTCGAGGGTGATAGT 222459
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || |||||
Sbjct 222458 CTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 222426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622284797200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |