Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq8 118 3e-21
seq6 93.3 1e-13
>seq8
Length=506948
Score = 118 bits (130), Expect = 3e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330
|||| ||| ||| |||||||| || ||||||| || || | |||||||| |||||
Sbjct 221944 TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCGTCTTCCAATTGC 221885
Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390
|| || |||||||| | ||| ||||| ||| || ||||| || || ||||| ||
Sbjct 221884 TTACCAGCGAAGATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTG 221825
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450
| || ||||| || || | || ||||| ||||| || || || ||||| || |||
Sbjct 221824 GACTTGACGTTGTCAATGGTGTCAGAAGATTCGACTTCAAGAGTAATAGTCTTACCAGTC 221765
Query 288451 AGAGTCTTGACGAATATCTGCAT 288473
| |||||||||||| || |||||
Sbjct 221764 AAAGTCTTGACGAAAATTTGCAT 221742
Score = 118 bits (130), Expect = 3e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330
|||| ||| ||| |||||||| || ||||| | || || | |||||||| |||||
Sbjct 222628 TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAATTGC 222569
Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390
|| || || ||||||| | ||||| ||| || ||||| || || ||||| ||
Sbjct 222568 TTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTG 222509
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450
| || ||||| || |||| || || || |||||||| ||||| ||||| ||||||
Sbjct 222508 GACTTAACGTTGTCAATAGTGTCAGAGGACTCAACTTCGAGGGTGATAGTCTTACCGGTC 222449
Query 288451 AGAGTCTTGACGAATATCTGCAT 288473
| |||||||||||| || |||||
Sbjct 222448 AAAGTCTTGACGAAAATTTGCAT 222426
Score = 104 bits (114), Expect = 6e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | | ||| | ||| | |||| ||| ||| |||||||| || ||||| |
Sbjct 222196 CCACCTCTCAATCTTAATACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 222137
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || | |||||||| ||||| || || || ||||||| | ||||| |||
Sbjct 222136 AAGGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 222077
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || || ||||| || | || ||||| || || | || ||||| |||
Sbjct 222076 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCAACT 222017
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| || |||| |||||||||||| || |||||
Sbjct 222016 TCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221970
Score = 100 bits (110), Expect = 7e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330
|||| ||| ||| |||||||| || ||||| | | || | ||||||||||||||
Sbjct 222400 TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTGCCGTCTTCTAATTGC 222341
Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390
|| || ||||| |||| | ||||| ||| || ||||| || || ||||| ||
Sbjct 222340 TTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTG 222281
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450
| || ||||| || |||| || || || ||||| || || || ||||| || |||
Sbjct 222280 GACTTAACGTTGTCAATAGTGTCAGAGGACTCGACTTCAAGAGTAATAGTCTTACCAGTC 222221
Query 288451 AGAGTCTTGACGAATATCTGCAT 288473
| ||||||||||| || |||||
Sbjct 222220 AAGGTCTTGACGAAAATTTGCAT 222198
>seq6
Length=1682205
Score = 93.3 bits (102), Expect = 1e-13
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || ||||| || ||||| | || || | |||||||| || || || || |||||
Sbjct 47307 TTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAA 47248
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| | ||||| | ||| || ||||| || ||||| || || | || || ||
Sbjct 47247 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGAATCTTGGACTTGACATT 47188
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | ||| || || ||||| | || || ||||| || || | |||||||||
Sbjct 47187 GTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCAGTTAAAGTCTTGAC 47128
Query 288462 GAATATCTGCATTATG 288477
||| || |||||| ||
Sbjct 47127 GAAAATTTGCATTTTG 47112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654248856780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |