Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 1e-12 >seq2 Length=3116340 Score = 89.7 bits (98), Expect = 1e-12 Identities = 164/238 (69%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 ||||| || ||||| || | | ||| | |||||| | || ||| | ||| | Sbjct 2726387 ATCATTACTGAAGCTGTCAAGATCGAGCAAGAATTCTTCACTGATGCTTTGCCA-GTTTC 2726329 Query 243562 CTTATT-GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 |||||| || |||||| | ||| | ||| | || ||| |||| ||||| |||||| | | Sbjct 2726328 CTTATTAGGAATGAACGCCGAATTGATGTGTCAATACGTCGAGTTCGTTGCCGACAGATT 2726269 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 || || || | || | |||| || |||||| || ||||| || | ||| ||||| Sbjct 2726268 ATTGATTGCTTTGGGCAACAAGAAGGTCTACAACGTCACCAACCCATTCGACTTCATGGA 2726209 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738 | ||| || | || || |||||||||||||| ||| | |||||||| || ||| Sbjct 2726208 GAACATCTCCTTAGCTGGTAAGACTAACTTCTTCGAGAAGAGAGTCAGTGACTACCAA 2726151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879858693500