Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq6 100 3e-16 seq8 93.3 5e-14 >seq6 Length=1682205 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || | || ||||| ||||| ||| ||||| || || ||||| |||| Sbjct 47343 ACCACCTCTCAATCTTAAGACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCAGA 47284 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| | |||| || | ||||||||||||||| || | || || ||||| | ||| Sbjct 47283 AAGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGG 47224 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | | ||||||||| ||| | || | |||| | | | |||||| || || | Sbjct 47223 AATACCTTCCTTGTCC-TGAATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGA 47165 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 | || | || ||||| || || |||| ||||| || || ||||||||||| Sbjct 47164 CTTCCAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 47113 >seq8 Length=506948 Score = 93.3 bits (102), Expect = 5e-14 Identities = 165/238 (69%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 41972 AATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATT 42031 ||||||| |||||||||| || | ||| ||||| || | ||| |||||||| || || Sbjct 222662 AATTTATTGACCTCCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTT 222603 Query 42032 GTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTG 42091 ||| |||| ||||| | |||| || | ||||||||||| || || | || || || Sbjct 222602 GTAGTCAGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTG 222543 Query 42092 GTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGC 42150 ||| | ||| | | ||||||| | || | || | | | ||| | | | ||||| Sbjct 222542 GTCTGGTGGAATACCTTCCTTGT-CTTGGATCTTGGACTTAACGTTGTCAATAGTGTCAG 222484 Query 42151 TCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || |||| ||||| || || || || | ||||| || || |||||||| Sbjct 222483 AGGACTCAACTTCGAGGGTGATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 222426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212732098400