Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 174 2e-38 >seq2 Length=3116340 Score = 174 bits (192), Expect = 2e-38 Identities = 485/736 (66%), Gaps = 6/736 (1%) Strand=Plus/Minus Query 93905 TGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGG 93964 |||||||||| || ||||| ||||| |||||||| |||||||| | | | |||| Sbjct 2774959 TGTTCAACGCTGGTACCCCATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCCATGAAGG 2774900 Query 93965 CCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACG 94024 |||||| || |||||||| ||||| | ||| |||||| || || || | Sbjct 2774899 ACGACTCTATTGACGGAATTTACGACACTTTAAAGACCTGTGCCTTGATTTCCAAGAGTG 2774840 Query 94025 CGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTA 94084 | || || || || | ||||| || | ||| | | ||| ||||||| |||| Sbjct 2774839 CTGGTGGTATTGGTTTACACATCCACAACATTCGTTCTACTGGTGCCTACATTGCTGGTA 2774780 Query 94085 CCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCT 94144 | || || || |||||||| || | || ||| | || |||||||| || | || | | Sbjct 2774779 CTAACGGTACATCCAACGGTATCATTCCAATGGTTCGTGTCTTCAATAATACTGCTAGAT 2774720 Query 94145 ACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGC 94204 |||| ||||| |||||| | | | ||| |||| || | || | || || |||| Sbjct 2774719 ACGTTGACCAAGGTGGTAACAAGCGTCCAGGTGCTTTTGCCTTATACTTGGAACCATGGC 2774660 Query 94205 ACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGG 94264 |||| ||| | | ||||| || | ||||||||||||| || || | || | Sbjct 2774659 ACGCAGACATTTTCGACTTCATTGATATCAGAAAGAACCACGGTAAGGAAGAGATTAGAG 2774600 Query 94265 CCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAA 94324 | ||||| | ||| ||| | ||| | |||||| | || ||||| | ||||| ||| Sbjct 2774599 CTAGAGATTTGTTCCCAGCTTTGTGGATTCCAGACTTGTTCATGAAGAGAGTCGAACAAA 2774540 Query 94325 ACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGAT 94384 || | |||| |||||| | ||| || ||| ||| || || | || || | || | Sbjct 2774539 ACGGTGATTGGACTCTTTTCTCTCCAAACGAAGCTCCAGGCTTGCCAGAAGTATACGG-T 2774481 Query 94385 CGCG-TTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGCCAGGAAGGTTAT 94442 || || ||||| ||||| | |||||||| | | ||| ||| || || | | Sbjct 2774480 GACGAATTCGAAGAGTTGTACGAACGTTACGAGAGAGAAGGTAGAGG-AAGAAACACTGT 2774422 Query 94443 GGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTA 94502 | || ||| ||||| | || |||| | ||| ||||| ||||| || | Sbjct 2774421 CAAGGCCCAAAAGTTGTGGTACGCCATTTTGGAGGCCCAGACTGAGACCGGTACTCCTTT 2774362 Query 94503 CATCTTGTTCAAGGAC-TCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCA 94561 ||| |||| ||||||| |||| ||| ||| ||||||| || || | || | |||| Sbjct 2774361 CATGTTGTACAAGGACGCCTGT-AACAAGAAGACCAACCAAAAGAACTTGGGTATAATCA 2774303 Query 94562 AGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGT 94621 || || || |||| || || || ||||| |||| || || || ||||||| | Sbjct 2774302 AGTCTTCTAACTTGTGTTGTGAAATCGTAGAGTACTCTTCCCCAGAGGAAGTTGCTGTCT 2774243 Query 94622 GTAACCTGGGCTCCAT 94637 ||||| ||| |||||| Sbjct 2774242 GTAACTTGGCCTCCAT 2774227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723138159600