Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq8 122 8e-23 seq6 109 5e-19 >seq8 Length=506948 Score = 122 bits (134), Expect = 8e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || |||||||||||||| || || ||| | ||| || || |||||||| Sbjct 221944 TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCGTCTTCCAATTGC 221885 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || || ||||| ||||| || ||||| ||||| || ||||| || || Sbjct 221884 TTACCAGCGAAGATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTG 221825 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | |||||| ||||| |||||||| ||||||| || || || || Sbjct 221824 GACTTGA-CGTTGTCAATGGTGTCAGAAGATTCGACTTCAAGAGTAATAGTCTTACCAGT 221766 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | ||| || || ||||||||||| Sbjct 221765 CAAAGTCTTGACGAAAATTTGCAT 221742 Score = 113 bits (124), Expect = 4e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || |||||||||||||| || || || | |||| | || |||||||| Sbjct 222172 TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTGCCGTCTTCCAATTGC 222113 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | ||||||| ||| ||||| || ||||| ||||| || ||||| || || Sbjct 222112 TTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTG 222053 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | |||||| ||||| || ||||| ||||||| || || || || Sbjct 222052 GACTTGA-CGTTGTCAATGGTGTCAGAAGATTCAACTTCAAGAGTAATAGTCTTACCAGT 221994 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | ||| || || ||||||||||| Sbjct 221993 CAAAGTCTTGACGAAAATTTGCAT 221970 Score = 109 bits (120), Expect = 5e-19 Identities = 168/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 45108 TTTATT--CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTAT 45165 |||||| ||||| | | ||||| || | || || || |||||||||||||| || | Sbjct 222660 TTTATTGACCTCCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGT 222601 Query 45166 AATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGT 45225 | || | ||| || || |||||||| || || || | ||||||| ||| |||| Sbjct 222600 AGTCAGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGT 222541 Query 45226 CCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAA 45284 | || ||||| ||||| || ||||| | | || | | | || | || | ||||| || Sbjct 222540 CTGGTGGAATACCTTCCTTGTCTTGGA-TCTTGGACTTAACGTTGTCAATAGTGTCAGAG 222482 Query 45285 GACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| |||||||| || | || || ||||| | ||| || || ||||||||||| Sbjct 222481 GACTCAACTTCGAGGGTGATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 222426 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || |||||||||||||| || || ||| | ||| || || |||||||| Sbjct 221716 TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCGTCTTCCAATTGC 221657 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || || ||||| ||||| || ||||| ||||| |||||||| || || Sbjct 221656 TTACCAGCGAAGATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGGATCTTG 221597 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | ||||| ||||| || ||||| | |||| || || ||||| Sbjct 221596 GACTTGA-CGTTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTCTTACCGGT 221538 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | || || || || |||||||| Sbjct 221537 CAATGTCTTAACGAAGATTTGCAT 221514 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || |||||||||||||| || || || | |||| | || || ||||| Sbjct 222400 TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTGCCGTCTTCTAATTGC 222341 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | ||||||| ||| ||||| || ||||| ||||| || ||||| | | || Sbjct 222340 TTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGA-TCTT 222282 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 | | | || | || | ||||| || ||||||||||| ||||||| || || || || Sbjct 222281 GGACTTAACGTTGTCAATAGTGTCAGAGGACTCGACTTCAAGAGTAATAGTCTTACCAGT 222222 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | || || || ||||||||||| Sbjct 222221 CAAGGTCTTGACGAAAATTTGCAT 222198 >seq6 Length=1682205 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 |||| || |||||||| ||||| || || || | ||| || || ||||| || Sbjct 47318 TGCAAGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAACTGC 47259 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | ||||||| ||| ||||| || ||||| ||||| || || ||||| || Sbjct 47258 TTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGAATCTTG 47199 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| || | ||||||||| ||||||||||| | |||| || || || ||| Sbjct 47198 GACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCAGTT 47139 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | ||| || || ||||||||||| Sbjct 47138 AAAGTCTTGACGAAAATTTGCAT 47116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003143499600