Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq8 96.9 4e-15 seq6 93.3 5e-14 >seq8 Length=506948 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||||||||| ||||| | |||| || | ||||| || ||||| Sbjct 221704 TCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAG 221645 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || || || || ||||| | || | | ||||| || |||||| ||||| ||| Sbjct 221644 ATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGGATCTTGGACTTGA-CGTT 221586 Query 46523 GCCACC-GTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | || ||||| ||||| || |||| || ||||| || || |||| || ||||| Sbjct 221585 GTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTCTTACCGGTCAATGTCTTAAC 221526 Query 46582 AAAGATTTGCATTTT 46596 ||||||||||| || Sbjct 221525 GAAGATTTGCATGTT 221511 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||||||||| ||||| | |||| || | ||||| || ||||| Sbjct 221932 TCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAG 221873 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || || || || ||||| | || | | |||||||| |||||| ||||| ||| Sbjct 221872 ATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGA-CGTT 221814 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| ||||| || || | || || || || || |||| || || || Sbjct 221813 GTCAATGGTGTCAGAAGATTCGACTTCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGAC 221754 Query 46582 AAAGATTTGCAT 46593 || |||||||| Sbjct 221753 GAAAATTTGCAT 221742 >seq6 Length=1682205 Score = 93.3 bits (102), Expect = 5e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | || |||| ||||| || ||||| ||||| |||||||| || Sbjct 47342 CCACCTCTCAATCTTAAGACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCAGAA 47283 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| | |||| || | |||||| || ||||| ||||| | || ||||| | || Sbjct 47282 AGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGA 47223 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||||||||| ||||| ||||| | | | |||||| || || || Sbjct 47222 ATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACT 47163 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||| || ||||| || || || | || || || || |||||||||||| Sbjct 47162 TCCAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTG 47112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238329345200