Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2 149 6e-31 seq6 95.1 1e-14 seq8 93.3 4e-14 >seq2 Length=3116340 Score = 149 bits (164), Expect = 6e-31 Identities = 546/846 (65%), Gaps = 17/846 (2%) Strand=Plus/Plus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 ||||| || || | || | ||||| || || ||||| || || | ||||| ||| | Sbjct 2726149 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTC 2726208 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAG---TGCTTGGTGCCGATCAGGTCGACG 132720 ||| || || || ||||||| ||||||| | |||| |||| | || | | Sbjct 2726209 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTGCCCAA-AG--CAATC 2726265 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 | | |||||||| |||||||||| |||||| |||| |||| || | ||| | Sbjct 2726266 AATAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAAT 2726325 Query 132781 AGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACG 132840 | || |||| || || |||| || ||||||||| ||| || || || | | Sbjct 2726326 AAGGAAACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTAATG 2726385 Query 132841 ATTTCCCTAACGCGCGCCGCG-CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGC 132899 || | | ||| | | | || | | ||| | || || ||||| ||| || || Sbjct 2726386 ATCTTCTCAACAATAACTGGGTCTGGTCTGTTTTGC-AAGTGAGAGAACAACAAACAGGC 2726444 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 |||||| || || || ||||| || | || | ||||||| ||||||||| || || Sbjct 2726445 GAAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCTGG 2726504 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019 ||| | || | || || | ||| || || | ||||| || || |||| || Sbjct 2726505 CATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAAAGATACC 2726564 Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCA 133079 ||| || || |||||||| || | | ||| |||||| |||||| | | | |||||| Sbjct 2726565 CTCAACAGCAGCGAAAGCTACTAATCTCTCACCGAACAAGGCTTCATCGTCAGAGATCCA 2726624 Query 133080 GCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAA 133139 | || ||||| || ||||| | | ||| || || || | ||||||||||| || Sbjct 2726625 TCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTGTCGATGGCGTT---GAA 2726681 Query 133140 ACGGAGTTTCTCTTCC-GAGGAAC--GCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 | ||| | ||||| ||| | ||||| ||||| || | || || | || Sbjct 2726682 AAGGAAGTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAATAAAGAGTATGTCTC 2726741 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 ||||| | ||| ||||| ||||| || ||||| || ||| || || | || Sbjct 2726742 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTG 2726801 Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316 ||||| || ||| ||| |||| || |||||||| || || || ||||||||| Sbjct 2726802 GACTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGGCGGCGAA 2726861 Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA---GCGCTCCCAGTC 133373 || |||| | | ||||| | | ||||| | |||||| | | | |||||| Sbjct 2726862 GAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTCAACTTGTGGTTCCAGTC 2726921 Query 133374 GCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTT 133433 || ||||| || ||| | || ||| ||||||| || || || || || || || Sbjct 2726922 AGTGGTATCCTTACTCAAGTCGATTTCTTCGGCGGTCCAGAAGGAGGCTTCAGCCTTCTT 2726981 Query 133434 GTACAT 133439 |||||| Sbjct 2726982 GTACAT 2726987 >seq6 Length=1682205 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| ||||| || || | || || || ||||| ||| | || |||||| || Sbjct 47113 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTGGAAGTCGAGTCC 47172 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||||| | | | | | || || || | ||||| || || ||||| | ||| Sbjct 47173 TCCGACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATTCCACCTGAC 47232 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| | | || | ||| || || ||| |||| |||| | || || |||||| Sbjct 47233 CAACAAAGATTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACTCTTTCTGACTAC 47292 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| |||||| | || |||| ||||| | | |||||||| || Sbjct 47293 AACATCCAGAAGGAATCCACCTTGCACTTGGTCTTAAGATTGAGAGGTGG 47342 >seq8 Length=506948 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || || || || |||||| |||| || ||| || | Sbjct 222426 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATCACCCTCGAAGTTGAGTCCTCT 222485 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| || |||| ||||| || || ||||| | ||||| Sbjct 222486 GACACTATTGACAACG-TTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCA 222544 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | || | || || || || |||| |||| | || || |||||||| Sbjct 222545 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAA 222604 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || ||||| || | |||||||| || Sbjct 222605 CATCCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGAGG 222652 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || || || || || || | || |||||| || | Sbjct 222198 ATGCAAATTTTCGTCAAGACCTTGACTGGTAAGACTATTACTCTTGAAGTCGAGTCCTCT 222257 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| || |||| ||||| || || ||||| | ||||| Sbjct 222258 GACACTATTGACAACG-TTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCA 222316 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC-GACTACA 38421 ||| | | |||| ||| || || || | || |||| || | ||| | | ||||||| Sbjct 222317 ACAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACG-GCAGAACCTTATCTGACTACA 222375 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||||| | || || || ||||| | | |||||||| || Sbjct 222376 ACATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 222424 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || || || || || || | || ||||| | | Sbjct 221742 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTCGAATCTTCT 221801 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| || || ||||| | ||||| Sbjct 221802 GACACCATTGACAACG-TCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCA 221860 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | ||| || || || |||| |||| | || || ||||||||| Sbjct 221861 ACAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCCGACTACAA 221920 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || || || ||||| | | |||||||| || Sbjct 221921 CATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 221968 Score = 82.4 bits (90), Expect = 8e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| |||||||| ||||| || || | || || || ||||| ||| | || || || | Sbjct 221510 AAACATGCAAATCTTCGTTAAGACATTGACCGGTAAGACCATTACCTTGGAAGTTGAATC 221569 Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 | |||| | | |||| | || || |||| || || || || ||||| | | Sbjct 221570 TTCTGACACTATTGACAACG-TCAAGTCCAAGATCCAAGATAAGGAAGGTATTCCACCAG 221628 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 ||||||| || | || | ||| || || || |||| |||| | || || ||||| Sbjct 221629 ACCAACAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCCGACT 221688 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||||| | || || || ||||| | | |||||||| || Sbjct 221689 ACAACATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 221740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172737478400