Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq8 156 2e-32 seq1 154 6e-32 seq7 134 5e-26 >seq8 Length=506948 Score = 156 bits (172), Expect = 2e-32 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || |||||||||| |||||||||||||| || ||||| ||| Sbjct 221742 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTCGAATCTTCT 221801 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || || ||||| |||||||| ||||| || || ||| Sbjct 221802 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 221861 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||||||||| ||| | || || ||| | ||||| || |||||| | | || || || Sbjct 221862 CAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCCGACTACAAC 221921 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || |||||||| || |||||| ||||||| Sbjct 221922 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGG 221965 Score = 147 bits (162), Expect = 9e-30 Identities = 167/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || |||||||||| |||||||||||||| |||||||| ||| Sbjct 221970 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTTGAATCTTCT 222029 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || || ||||| |||||||| ||||| || || ||| Sbjct 222030 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222089 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || || | || || ||| | ||||| || ||||| || | || || || Sbjct 222090 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACCTTATCTGACTACAAC 222149 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || |||||||| ||||||||| ||||||| Sbjct 222150 ATCCAAAAGGAATCCACTCTTCACTTGGTATTAAGATTGAGAGG 222193 Score = 145 bits (160), Expect = 3e-29 Identities = 177/240 (74%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 391035 atatattatattata-ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCT 391093 ||| | |||| || | ||| | || |||||||| ||| |||| ||||| || ||||| | Sbjct 221498 ATAGAATATAATAAACATGCAAATCTTCGTTAAGACATTGACCGGTAAGACCATTACCTT 221557 Query 391094 TGATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGG 391153 || |||||||| ||||| | ||||| | || || || |||||||||||||| Sbjct 221558 GGAAGTTGAATCTTCTGACACTATTGACAACGTCAAGTCCAAGATCCAAGATAAGGAAGG 221617 Query 391154 AATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAAC 391213 ||||| || || |||||||||||||| ||| | || || ||| | ||||| || ||||| Sbjct 221618 TATTCCACCAGACCAACAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAAC 221677 Query 391214 TTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 | | | || || || || | ||||| | || |||||||| || |||||| ||||||| Sbjct 221678 TCTTTCCGACTACAACATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGG 221737 Score = 143 bits (158), Expect = 1e-28 Identities = 166/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || |||||||||| |||||||||||||| || || || ||| Sbjct 222198 ATGCAAATTTTCGTCAAGACCTTGACTGGTAAGACTATTACTCTTGAAGTCGAGTCCTCT 222257 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| |||| || || ||||| |||||||| ||||| || || ||| Sbjct 222258 GACACTATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222317 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || |||||| | || || ||| | ||||| || ||||| || | || || || Sbjct 222318 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGCAGAACCTTATCTGACTACAAC 222377 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || |||||||| || |||||| ||||||| Sbjct 222378 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGG 222421 >seq1 Length=3488706 Score = 154 bits (170), Expect = 6e-32 Identities = 285/417 (68%), Gaps = 11/417 (3%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || ||||| | |||||||| | || || ||||| || || ||| |||| |||||| Sbjct 2762569 GGTAAGCCAAACATTCAAGTTGAGTACAAGGGTGAGACCAAGGTTTTCACTCCAGAAGAA 2762628 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || |||||| ||||| | || ||||| || || || || | ||||| | Sbjct 2762629 ATCTCCTCTATGATTCTTTCCAAGATGAAGGAGACTGCTGAGGGTTTCCTTGGTACCAAG 2762688 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||| ||||| || | || || || ||||| ||||| || | ||| | ||||| || Sbjct 2762689 GTTAACGATGCTGTTGTCACCGTCCCAGCTTACTTCAACGACTCCCAAAGACAAGCCACC 2762748 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || | |||||||||||||| ||| | |||||||||| ||||| || || Sbjct 2762749 AAGGATGCTGGTCTCATTGCTGGTTTAAACGTTATGAGAATTATTAACGAACCAACTGCC 2762808 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAA-AC---AGAAGaaaaaaaTATTTT 451488 ||||| | || || || || | | ||||| || |||||| || || || | Sbjct 2762809 GCTGCAATTGCTTACGGTCT-------TGACAAGAAGACCGAAGAAGAGAAGAACGTTCT 2762861 Query 451489 AGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGT 451548 | || || || |||||||| || ||| || || | || || ||||| || | Sbjct 2762862 TATCTTCGACTTGGGTGGAGGTACCTTCGATGTCTCCTTATTGTCTATCGAAGACGGTAT 2762921 Query 451549 ATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || || ||||| || |||||| ||||| | || ||||||||| | ||||| Sbjct 2762922 CTTCGAGGTCAAGGCCACTGCTGGTGACACTCACTTGGGTGGTGAAGATTTCGATAA 2762978 Score = 118 bits (130), Expect = 4e-21 Identities = 259/387 (67%), Gaps = 6/387 (2%) Strand=Plus/Plus Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276 || || |||||| || ||||| ||||||||||||| || |||| || | ||| Sbjct 1347348 TACAATGGTGAAGAAAAGACTTTCTCTCCTGAAGAAATCTCTGGTATGATTTTAGGTAAG 1347407 Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336 ||||| | | || ||| |||| | ||| || ||| | || || |||||||| Sbjct 1347408 ATGAAGAACATCGCCGAAGAATACTTGGGTAAGAAGGTCACTCACGCCGTTGTTACTGTT 1347467 Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396 || ||||| ||||| ||||| ||| | ||||| || || || || || ||||||||| Sbjct 1347468 CCAGCTTACTTCAACGATGCCCAAAGACAAGCCACCAAGGACGCTGGTACCATTGCTGGT 1347527 Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGA 451456 || || ||| | |||| |||| || || || || ||||| | || ||||| ||| Sbjct 1347528 TTGAACGTTTTGAGAATCGTTAACGAGCCAACCGCCGCTGCCATTGCCTATGGTTTAG-- 1347585 Query 451457 AAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCAT 451516 ||| | || | ||||| | || | || | ||| || ||||||||||| Sbjct 1347586 ---ACAAGACCGAC-GGTGAAAAGCAAATCATTGTTTATGACTTGGGTGGAGGAACCTTC 1347641 Query 451517 GATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGAT 451576 ||| ||| | | || ||||||| ||| || || || || || || |||||| Sbjct 1347642 GATGTTTCCTTGTTGTCTATTGAAGGTGGTGTTTTCGAGGTCTTAGCTACTGCTGGTGAC 1347701 Query 451577 ACTCATCTAGGAGGTGAAGATATTGAT 451603 ||||| | || ||||||||| | ||| Sbjct 1347702 ACTCACTTGGGTGGTGAAGATTTCGAT 1347728 Score = 96.9 bits (106), Expect = 1e-14 Identities = 104/135 (77%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 420808 GTAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAAC 420867 || || ||||||||||| | ||||||||| | ||||| ||| ||||||||||| || || Sbjct 575841 GTGAAAACAACAGTTTTGGCAGGCATATTCAAACCAATAGAGAAAGTTTCAGTAGCAAAA 575900 Query 420868 AAAACTTT-AATTAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAAT 420926 | |||||| || | || || | ||| ||||||| ||||| ||||||||||| | Sbjct 575901 AGAACTTTCAAAAGACCTTCCTGGAACAAG-ATTTCAATGATTTCCTTTAAAATAGGTAA 575959 Query 420927 TATACCAGAATGATG 420941 || |||||| ||||| Sbjct 575960 TAAACCAGAGTGATG 575974 >seq7 Length=1466551 Score = 134 bits (148), Expect = 5e-26 Identities = 282/418 (67%), Gaps = 7/418 (2%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 ||||| ||| | ||| | || | | || || || || || || || | || ||||| Sbjct 970179 GGAAAACCCAACATTGAGGTTGAATTCAAGGGCGAGACAAAGACCTTCACACCAGAAGAG 970120 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || ||| || | || ||||| ||||| || ||| || |||||||| || Sbjct 970119 ATCTCGTCCATGATTTTGGTCAAGATGAAGGAAACCGCTGAAAGTTACCTTGGTTCTACA 970060 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 | ||||| || || |||||||||| ||||| ||||| || | || | || || || Sbjct 970059 ATCACTGACGCCGTTGTTACTGTTCCTGCTTACTTCAACGACTCTCAGAGACAGGCCACC 970000 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 ||||| || || | ||||| ||||| |||||| | |||| || || ||||| || || Sbjct 969999 AAAGACGCCGGTCTCATTGCCGGTTTGAATGTTTTGAGAATCATCAACGAACCAACTGCC 969940 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAG-----AAGaaaaaaaTATTT 451487 |||||| | || || || | ||| || || | | || | ||| | ||| | | Sbjct 969939 GCTGCTATTGCTTACGGTTT-GGACAAG-AAGGGCCAGAGCTCTCACGAACAGAATGTAT 969882 Query 451488 TAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGG 451547 || | || ||||| || || || ||| |||| ||| | | | ||||| || || Sbjct 969881 TAATCTTCGATTTGGGAGGTGGTACTTTTGATGTTTCGTTGTTAGCCATTGATGAAGGTA 969822 Query 451548 TATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 | || ||||| ||||| ||| ||||| || || | |||||||||||| | || || Sbjct 969821 TTTTCGAAGTCAAGGCCACCGCCGGTGACACCCACTTGGGAGGTGAAGATTTCGACAA 969764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718146861080