Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq8 156 2e-32
seq1 154 6e-32
seq7 134 5e-26
>seq8
Length=506948
Score = 156 bits (172), Expect = 2e-32
Identities = 169/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || |||||||||| |||||||||||||| || ||||| |||
Sbjct 221742 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTCGAATCTTCT 221801
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | || || || ||||| |||||||| ||||| || || |||
Sbjct 221802 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 221861
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||||||||||| ||| | || || ||| | ||||| || |||||| | | || || ||
Sbjct 221862 CAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCCGACTACAAC 221921
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || |||||||| || |||||| |||||||
Sbjct 221922 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGG 221965
Score = 147 bits (162), Expect = 9e-30
Identities = 167/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || |||||||||| |||||||||||||| |||||||| |||
Sbjct 221970 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTTGAATCTTCT 222029
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | || || || ||||| |||||||| ||||| || || |||
Sbjct 222030 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222089
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | || || || | || || ||| | ||||| || ||||| || | || || ||
Sbjct 222090 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACCTTATCTGACTACAAC 222149
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || |||||||| ||||||||| |||||||
Sbjct 222150 ATCCAAAAGGAATCCACTCTTCACTTGGTATTAAGATTGAGAGG 222193
Score = 145 bits (160), Expect = 3e-29
Identities = 177/240 (74%), Gaps = 1/240 (0%)
Strand=Plus/Plus
Query 391035 atatattatattata-ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCT 391093
||| | |||| || | ||| | || |||||||| ||| |||| ||||| || ||||| |
Sbjct 221498 ATAGAATATAATAAACATGCAAATCTTCGTTAAGACATTGACCGGTAAGACCATTACCTT 221557
Query 391094 TGATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGG 391153
|| |||||||| ||||| | ||||| | || || || ||||||||||||||
Sbjct 221558 GGAAGTTGAATCTTCTGACACTATTGACAACGTCAAGTCCAAGATCCAAGATAAGGAAGG 221617
Query 391154 AATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAAC 391213
||||| || || |||||||||||||| ||| | || || ||| | ||||| || |||||
Sbjct 221618 TATTCCACCAGACCAACAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAAC 221677
Query 391214 TTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
| | | || || || || | ||||| | || |||||||| || |||||| |||||||
Sbjct 221678 TCTTTCCGACTACAACATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGG 221737
Score = 143 bits (158), Expect = 1e-28
Identities = 166/224 (74%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || |||||||||| |||||||||||||| || || || |||
Sbjct 222198 ATGCAAATTTTCGTCAAGACCTTGACTGGTAAGACTATTACTCTTGAAGTCGAGTCCTCT 222257
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||||| |||| || || ||||| |||||||| ||||| || || |||
Sbjct 222258 GACACTATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222317
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | || |||||| | || || ||| | ||||| || ||||| || | || || ||
Sbjct 222318 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGCAGAACCTTATCTGACTACAAC 222377
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || |||||||| || |||||| |||||||
Sbjct 222378 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGG 222421
>seq1
Length=3488706
Score = 154 bits (170), Expect = 6e-32
Identities = 285/417 (68%), Gaps = 11/417 (3%)
Strand=Plus/Plus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
|| ||||| | |||||||| | || || ||||| || || ||| |||| ||||||
Sbjct 2762569 GGTAAGCCAAACATTCAAGTTGAGTACAAGGGTGAGACCAAGGTTTTCACTCCAGAAGAA 2762628
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || |||||| ||||| | || ||||| || || || || | ||||| |
Sbjct 2762629 ATCTCCTCTATGATTCTTTCCAAGATGAAGGAGACTGCTGAGGGTTTCCTTGGTACCAAG 2762688
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|||| ||||| || | || || || ||||| ||||| || | ||| | ||||| ||
Sbjct 2762689 GTTAACGATGCTGTTGTCACCGTCCCAGCTTACTTCAACGACTCCCAAAGACAAGCCACC 2762748
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| ||||| || | |||||||||||||| ||| | |||||||||| ||||| || ||
Sbjct 2762749 AAGGATGCTGGTCTCATTGCTGGTTTAAACGTTATGAGAATTATTAACGAACCAACTGCC 2762808
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAA-AC---AGAAGaaaaaaaTATTTT 451488
||||| | || || || || | | ||||| || |||||| || || || |
Sbjct 2762809 GCTGCAATTGCTTACGGTCT-------TGACAAGAAGACCGAAGAAGAGAAGAACGTTCT 2762861
Query 451489 AGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGT 451548
| || || || |||||||| || ||| || || | || || ||||| || |
Sbjct 2762862 TATCTTCGACTTGGGTGGAGGTACCTTCGATGTCTCCTTATTGTCTATCGAAGACGGTAT 2762921
Query 451549 ATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| || || ||||| || |||||| ||||| | || ||||||||| | |||||
Sbjct 2762922 CTTCGAGGTCAAGGCCACTGCTGGTGACACTCACTTGGGTGGTGAAGATTTCGATAA 2762978
Score = 118 bits (130), Expect = 4e-21
Identities = 259/387 (67%), Gaps = 6/387 (2%)
Strand=Plus/Plus
Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276
|| || |||||| || ||||| ||||||||||||| || |||| || | |||
Sbjct 1347348 TACAATGGTGAAGAAAAGACTTTCTCTCCTGAAGAAATCTCTGGTATGATTTTAGGTAAG 1347407
Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336
||||| | | || ||| |||| | ||| || ||| | || || ||||||||
Sbjct 1347408 ATGAAGAACATCGCCGAAGAATACTTGGGTAAGAAGGTCACTCACGCCGTTGTTACTGTT 1347467
Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396
|| ||||| ||||| ||||| ||| | ||||| || || || || || |||||||||
Sbjct 1347468 CCAGCTTACTTCAACGATGCCCAAAGACAAGCCACCAAGGACGCTGGTACCATTGCTGGT 1347527
Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGA 451456
|| || ||| | |||| |||| || || || || ||||| | || ||||| |||
Sbjct 1347528 TTGAACGTTTTGAGAATCGTTAACGAGCCAACCGCCGCTGCCATTGCCTATGGTTTAG-- 1347585
Query 451457 AAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCAT 451516
||| | || | ||||| | || | || | ||| || |||||||||||
Sbjct 1347586 ---ACAAGACCGAC-GGTGAAAAGCAAATCATTGTTTATGACTTGGGTGGAGGAACCTTC 1347641
Query 451517 GATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGAT 451576
||| ||| | | || ||||||| ||| || || || || || || ||||||
Sbjct 1347642 GATGTTTCCTTGTTGTCTATTGAAGGTGGTGTTTTCGAGGTCTTAGCTACTGCTGGTGAC 1347701
Query 451577 ACTCATCTAGGAGGTGAAGATATTGAT 451603
||||| | || ||||||||| | |||
Sbjct 1347702 ACTCACTTGGGTGGTGAAGATTTCGAT 1347728
Score = 96.9 bits (106), Expect = 1e-14
Identities = 104/135 (77%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 420808 GTAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAAC 420867
|| || ||||||||||| | ||||||||| | ||||| ||| ||||||||||| || ||
Sbjct 575841 GTGAAAACAACAGTTTTGGCAGGCATATTCAAACCAATAGAGAAAGTTTCAGTAGCAAAA 575900
Query 420868 AAAACTTT-AATTAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAAT 420926
| |||||| || | || || | ||| ||||||| ||||| ||||||||||| |
Sbjct 575901 AGAACTTTCAAAAGACCTTCCTGGAACAAG-ATTTCAATGATTTCCTTTAAAATAGGTAA 575959
Query 420927 TATACCAGAATGATG 420941
|| |||||| |||||
Sbjct 575960 TAAACCAGAGTGATG 575974
>seq7
Length=1466551
Score = 134 bits (148), Expect = 5e-26
Identities = 282/418 (67%), Gaps = 7/418 (2%)
Strand=Plus/Minus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
||||| ||| | ||| | || | | || || || || || || || | || |||||
Sbjct 970179 GGAAAACCCAACATTGAGGTTGAATTCAAGGGCGAGACAAAGACCTTCACACCAGAAGAG 970120
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || || ||| || | || ||||| ||||| || ||| || |||||||| ||
Sbjct 970119 ATCTCGTCCATGATTTTGGTCAAGATGAAGGAAACCGCTGAAAGTTACCTTGGTTCTACA 970060
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
| ||||| || || |||||||||| ||||| ||||| || | || | || || ||
Sbjct 970059 ATCACTGACGCCGTTGTTACTGTTCCTGCTTACTTCAACGACTCTCAGAGACAGGCCACC 970000
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
||||| || || | ||||| ||||| |||||| | |||| || || ||||| || ||
Sbjct 969999 AAAGACGCCGGTCTCATTGCCGGTTTGAATGTTTTGAGAATCATCAACGAACCAACTGCC 969940
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAG-----AAGaaaaaaaTATTT 451487
|||||| | || || || | ||| || || | | || | ||| | ||| | |
Sbjct 969939 GCTGCTATTGCTTACGGTTT-GGACAAG-AAGGGCCAGAGCTCTCACGAACAGAATGTAT 969882
Query 451488 TAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGG 451547
|| | || ||||| || || || ||| |||| ||| | | | ||||| || ||
Sbjct 969881 TAATCTTCGATTTGGGAGGTGGTACTTTTGATGTTTCGTTGTTAGCCATTGATGAAGGTA 969822
Query 451548 TATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
| || ||||| ||||| ||| ||||| || || | |||||||||||| | || ||
Sbjct 969821 TTTTCGAAGTCAAGGCCACCGCCGGTGACACCCACTTGGGAGGTGAAGATTTCGACAA 969764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975718146861080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |