Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 286 4e-72 seq3 86.0 8e-12 >seq2 Length=3116340 Score = 286 bits (316), Expect = 4e-72 Identities = 1132/1750 (65%), Gaps = 47/1750 (3%) Strand=Plus/Minus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| ||||| | || | ||| | || | || |||||||| || || ||||| || Sbjct 2775080 GAAAGACCACAACATTTGATTATGAGAGTTTCTATTGGTATCCACGGTGATGATATCGAG 2775021 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACC 111725 || | || | ||| || |||||||| || | |||| |||| | ||||| Sbjct 2775020 AAGGTCATTGAATCTTACAACTTGATGTCCCAACGTTTCTTCACTCACGGTTCTCCAACT 2774961 Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785 | |||||||||||||| ||| || |||||||| |||||||||| | || | ||| Sbjct 2774960 TTGTTCAACGCTGGTACCCCATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCCATGAAG 2774901 Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845 || || || || | || ||||||| |||| | | |||||| || || ||| | Sbjct 2774900 GACGACTCTATTGACGGAATTTACGACACTTTAAAGACCTGTGCCTTGATTTCCAAGAGT 2774841 Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGG 111904 ||||||||||| || | |||||||| | | | | || || | ||| || Sbjct 2774840 GCTGGTGGTATTGGTTTACACATCCACAACATTCG-TTCTACTGGTGCCTACATTGCTGG 2774782 Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964 ||| || ||| ||| | ||||| ||||||||| |||| || || || || || | Sbjct 2774781 TACTAACGGTACATCCAACGGTATCATTCCAATGGTTCGTGTCTTCAATAATACTGCTAG 2774722 Query 111965 CTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCC 112018 || || |||||| ||| ||||| || || || | || | || | || || Sbjct 2774721 ATACGTTGACCAAGGTGGTAACAAGCGTC-CA--GGTGCTTTTGCCTTATACTTGGAACC 2774665 Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGC 112078 ||||||||| || || | || ||| |||| | | ||||| ||| | || ||| Sbjct 2774664 ATGGCACGCAGACATTTTCGACTTCATTGATATCAGAAAGAACCACGGTAAGGAAGAGAT 2774605 Query 112079 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 112138 | | ||| | ||| | ||| | ||||||||||| | |||||||||||||| || Sbjct 2774604 TAGAGCTAGAGATTTGTTCCCAGCTTTGTGGATTCCAGACTTGTTCATGAAGAGAGTCGA 2774545 Query 112139 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGT 112198 | | || ||||| |||| || | |||| || | || || || | | || | Sbjct 2774544 ACAAAACGGTGATTGGACTCTTTTCTCTCCAAACGAAGCTCCAGGCTTGCCAGAAGTATA 2774485 Query 112199 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGAC 112258 ||||| || || |||| | ||| | |||||| |||| || | | | || Sbjct 2774484 CGGTGACGAATTCGAAGAGTTGTACGAACGTTACGAGAGAGAAGGTAGAGGAAGAAACAC 2774425 Query 112259 GGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317 || | || | | | ||||| | || ||| | || | || || ||||| ||||| | Sbjct 2774424 TGT-CAAGGCCCAAAAGTTGTGGTACGCCATTTTGGAGGCCCAGACTGAGACCGGTACTC 2774366 Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377 | | ||| | ||||| |||||||||||| | |||| || |||||||| |||||| | | Sbjct 2774365 CTTTCATGTTGTACAAGGACGCCTGTAACAAGAAGACCAACCAAAAGAACTTGGGTATAA 2774306 Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437 ||||| ||| ||| | ||| |||||| | || | | | ||| || |||| Sbjct 2774305 TCAAGTCTTCTAACTTGTGTTGTGAAATCGTAGAGTACTCTTCCCCAGAGGAAGTTGCTG 2774246 Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT-T 112496 | |||||| | || || || ||| | || | || || || | ||| | || | Sbjct 2774245 TCTGTAACTTGGCCTCCATTGCTTTACCTTCCTTTGCTGAGAAGGACAGCAAGTCTTTGT 2774186 Query 112497 G-----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAG 112551 | | | ||| || | |||||||| || || | ||||| ||| | |||| Sbjct 2774185 GGTACAACTTTGAGAAGTTGCACGAAGTCACCAAGTCCGTCACTCGTAACTTGAACAAGA 2774126 Query 112552 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611 | ||||| ||||| | ||||| ||| | ||| | |||||| | |||| || | | Sbjct 2774125 TCATTGACAGAAACTACTACCCAGTTCCGGAAGCTGAGAGATCTAACAAGAGAAACAGAC 2774066 Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTT 112670 |||||| | | |||||||||||| | || ||| ||||| | ||| || |||| Sbjct 2774065 CAATTGCTTTGGGTGTCCAAGGTTTGGCTGATACCTTCATGGCATTGAGATTAC-CATTC 2774007 Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCT 112730 || ||| | || || | ||| | || | || ||||| || || ||||||| || Sbjct 2774006 GACTCCCAAGAGGCTAGAGAATTGAACATCCAAATCTTTGAAACTATCTATCACGGTGCC 2773947 Query 112731 CTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790 |||| || | || ||||| | | || || || || || | | ||||| ||| Sbjct 2773946 GTTGAAGCCTCTATCGAATTGGCTGCCGAAGAAGGCCCTTACGAGTCTTACGAGGGCTCT 2773887 Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA--GCTTCACT 112848 |||||||| ||||| || | |||| ||| ||||||| | || |||| | | | | Sbjct 2773886 CCAGCTTCCCAAGGATTGTTACAATATGACTTGTGGGACAGAAAG-CCAACTGAGTTA-T 2773829 Query 112849 ACGACTGGGACGCTCTCAAG--GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 112906 |||||||| | | ||| ||| | | || | ||| | | || | | || Sbjct 2773828 GGGACTGGGATTCCTTGAAGCAGAAGTTGGCTA--AGCACGGTTTGAGAAATTCTTTGTT 2773771 Query 112907 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 112966 | | || ||||||||||| ||||| || | |||||||||||||| || ||||| ||||| Sbjct 2773770 GGTCGCCCCAATGCCAACTGCCTCAACTTCCCAAATCTTGGGTAACAACGAATGTTTTGA 2773711 Query 112967 ACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 113025 ||| ||||| | |||||||| ||| |||||| | || || || ||| |||||||| Sbjct 2773710 ACCATACACATCTAACATCTACTCT-AGAAGAGTGTTGGCTGGTGAATTTCAGATTGTCA 2773652 Query 113026 ACAAGCAT-CTCG-TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA 113083 || ||| || | || ||| | || | ||| ||||| | | | |||||| | Sbjct 2773651 AC--CCATACTTGTTGCGTGATTTGGTCGACTTGGGTATCTGGAACGATGCCATGAAGAA 2773594 Query 113084 TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTG-TGGATATTCCAGATGAAATTA 113142 ||| | |||||| | || | |||| || |||||||||| ||| Sbjct 2773593 CAACATCATTTCTAACAATGGTTCTA-TCCAGTCATTGCCTAATGTTCCAGATGAGCTTA 2773535 Query 113143 AGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAG 113202 || || || || |||||||||||| ||| || | ||||||||||| || | Sbjct 2773534 AGGCCTTATATAAGACTGTTTGGGAAATCTCACAAAAGCATATTATTGACATGGCTGCTG 2773475 Query 113203 ATCGTGGTCGCTTCATTGATCAAAGTCAAAG--TATGA--ATCTA-TTCATGGAAAGTCC 113257 | | | | ||||||||| | ||||| || | ||| ||| | ||| ||| || Sbjct 2773474 ACAGAGCTGCCTTCATTGACC--AGTCACAGTCTTTGAACATCCACATCAAGGA---CCC 2773420 Query 113258 AACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGG 113317 ||| ||| ||||| | |||||||| | ||| |||||||||||||| | || || || Sbjct 2773419 AACAATGGGTAAGCTTACCTCTATGCATTTCTACGGTTGGAAGAAGGGTTTGAAGACTGG 2773360 Query 113318 GATGTATTAC 113327 ||||||||| Sbjct 2773359 TATGTATTAC 2773350 Score = 89.7 bits (98), Expect = 6e-13 Identities = 280/421 (67%), Gaps = 16/421 (4%) Strand=Plus/Minus Query 101901 ATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAACTTT 101960 ||| |||| ||||| || | || ||||| ||||| ||||| | | | ||||| Sbjct 2726873 ATCTTGGCTTTCTTCGCCGCCTCTGATGGTATTGTCAACGAGAACTTGGTTGAGAACTTC 2726814 Query 101961 GCTGATGAGGTGCAATCCTCTGAAGCGAGATCTTTCTATGCGTATCAATGTCATAATG-A 102019 ||| ||| || ||| | | ||||| | | |||||| | || || | | || ||| | Sbjct 2726813 TCTGCTGAAGTCCAAATCCCAGAAGCCAAGTGTTTCTACG-GTTTCCAAATTATGATGGA 2726755 Query 102020 AATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGA 102079 || | || ||||||||| | | | || |||| || ||||||| || | Sbjct 2726754 AAACATTCACTCTGAGACATACTCTTTATTAATTGACACTTACGTTAAGGACC---CTAA 2726698 Query 102080 GAAGAAGCAGC--TC--TTTGAA-GCCATCCA-AACAGTTCCATGTATTCAAAAGAAAGC 102133 | ||||| | || ||| || |||||| | |||| |||||||||| |||||| || Sbjct 2726697 G--GAAGCCGACTTCCTTTTCAACGCCATCGACAACA-TTCCATGTATCAGAAAGAAGGC 2726641 Query 102134 GGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCG 102192 || ||||| ||| ||| | | || | | || || || | |||| || | | | Sbjct 2726640 TGACTGGGCCTTGAGATGGATCTCTGACGATGAAGCCTTG-TTCGGTGAGAGATTAGTAG 2726582 Query 102193 CATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCA 102252 | || || ||||||||||||||| ||| ||| |||||| |||| | ||| | | Sbjct 2726581 CTTTCGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCCTTCGCTTCTATCTTCTGGTTGA 2726522 Query 102253 AGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 102312 ||||| ||||| | ||||||||| | ||||||||||| | |||| | | ||||| | Sbjct 2726521 AGAAGAGAGGTTTAATGCCAGGTTTGACTTTCTCCAACGAATTGATCTGTAGAGACGAAG 2726462 Query 102313 G 102313 | Sbjct 2726461 G 2726461 >seq3 Length=2759450 Score = 86.0 bits (94), Expect = 8e-12 Identities = 119/165 (72%), Gaps = 4/165 (2%) Strand=Plus/Plus Query 163556 GTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTA--TCCAAGTTGGTGCGGGTGTTA 163613 || || ||| |||||||| | || | |||||||||| |||| |||||| |||||| Sbjct 260325 GTCGCCCCAAGATCTGGTTTGGCCGCAAAACACGGTATTTCCA--CTGGTGCTGGTGTTG 260382 Query 163614 TTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACAAAGACT 163673 | ||| | ||||||| || || ||||| || |||| ||||| || |||||||||| Sbjct 260383 TGGATGCTGACTACAGAGGAGAGGTCAAGGTTATTCTTTTCAACCACTCCGACAAAGACT 260442 Query 163674 TTGAGGTAAAGAGGGGGGAGCGCATCGCACAACTTGTTCTTGAGA 163718 ||| || ||| |||||| | || || ||| | || | |||| Sbjct 260443 TTGCTGTCGAGAAGGGGGATAGAATTGCCCAATTAGTGTTGGAGA 260487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742322407200