Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 206 3e-48 seq1 91.5 2e-13 >seq2 Length=3116340 Score = 206 bits (228), Expect = 3e-48 Identities = 1157/1833 (63%), Gaps = 47/1833 (3%) Strand=Plus/Plus Query 109414 TAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTG 109473 ||||||||||| || || | ||| |||||| |||| | |||||| || | || || Sbjct 2773351 TAATACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTA 2773410 Query 109474 GAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCA 109533 | ||| || || || | ||||| ||||| ||||| || ||||| | | Sbjct 2773411 CCCATTGTTGGGTCCTTGATGTGGATGTTCAAAGACTGTGACTGGTCAATGAAGGCAGCT 2773470 Query 109534 CGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAA 109593 | ||||| |||||||| || ||| |||||| |||||||| |||||||| || || Sbjct 2773471 CTGTCAGCAGCCATGTCAATAATATGCTTTTGTGAGATTTCCCAAACAGTCTTATATAAG 2773530 Query 109594 TTCTTGATATCATCGGGAATGTCCA-CGATGTTTTGAATAGAGCCACCAGCCTTCACCAT 109652 ||| | ||||| |||| | | ||| | || |||| |||| || || Sbjct 2773531 GCCTTAAGCTCATCTGGAACATTAGGCAATGACTGGA-TAGA---ACCATTGTTAGAAAT 2773586 Query 109653 GAGATC---CTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT-CAACAAG-A 109707 || | |||||| | | ||||| ||| | | | ||| ||||||| | Sbjct 2773587 GATGTTGTTCTTCATGGCATCGTTCCAGATACCCAAGTCGACCAAATCACGCAACAAGTA 2773646 Query 109708 TGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTG 109767 || |||||| | |||||||||||| | | || ||||||||||| ||| Sbjct 2773647 TGG--GTTGACAATCTGAAATTCACCAGCCAACACTCTTCTAGAGTAGATGTTAGATGTG 2773704 Query 109768 TAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGA 109827 || ||||| ||||| || ||||| || | |||||| | ||| || || || ||||| || Sbjct 2773705 TATGGTTCAAAACATTCGTTGTTACCCAAGATTTGGGAAGTTGAGGCAGTTGGCATTGGG 2773764 Query 109828 GCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAA 109887 || | | | | |||| | ||| | | | | | || || | ||||| Sbjct 2773765 GCGACCAACAAAGAATTTCTCAAACCGTGCTTAGCCAACTTCTGCTTCAAGGAATCCCAG 2773824 Query 109888 TCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCA 109947 || | | ||| | || | || | ||||||| || ||| | | || | Sbjct 2773825 TC----CCATAACTCAGTT--GGCTTTCTGTCCCACAAGTCATATTGTAACAATCCTTGG 2773878 Query 109948 GCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAA 110007 | ||| ||||| |||| | || |||||| | || || | | ||||| ||| || Sbjct 2773879 GAAGCTGGAGAGCCCTCGTAAGACTCGTAAGGGCCTTCTTCGGCAGCCAATTCGATAGAG 2773938 Query 110008 GCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCT 110067 || || | || | ||||| ||||| ||||| || || |||| | || |||| Sbjct 2773939 GCTTCAACGGCACCGTGATAGATAGTTTCAAAGATTTGGATGTTCAATTCTCTAGCCTCT 2773998 Query 110068 TCACAGTCGAAGGGAAGACCACAAAGA-ATAAACACATCCGCTAGACCCTGAACACCGAG 110126 | ||||||| || | | | ||| | || || ||| || | ||| || ||||| | Sbjct 2773999 TGGGAGTCGAATGGTA-ATCTCAATGCCATGAAGGTATCAGCCAAACCTTGGACACCCAA 2774057 Query 110127 ACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCT---ACGGGGTAAAAGTT 110183 | |||| || | | || ||||||| | || ||| ||| || ||||| |||| Sbjct 2774058 AGCAATTGGTCTGTTTCTCTTGTTAGATC-TCT--CAGCTTCCGGAACTGGGTAGTAGTT 2774114 Query 110184 GCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTC 110243 | ||| |||| | || | || || || | ||| |||| ||| || | || || Sbjct 2774115 TCTGTCAATGATCTTGTTCAAGTTACGAGTGACGGACTTGGTGACTTCGTGCAACTTCTC 2774174 Query 110244 GTAATCGAAC------GTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGC 110297 | | | || | || | ||||| | || | || | |||||| || || Sbjct 2774175 AAAGTTGTACCACAAAGACTTGCTGTCCTTCTCAGCAAAGGAAGGTAAAGCAATGGAGGC 2774234 Query 110298 AAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTT 110357 | || || |||| | || ||| | | ||| || | ||||| ||||||||| Sbjct 2774235 CAAGTTACAGACAGCAACTTCCTCTGGGGAAGAGTACTCTACGATTTCACAACACAAGTT 2774294 Query 110358 GGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATA 110417 ||| ||| || | |||||||||||| || || | || ||| || || ||||| || Sbjct 2774295 AGAAGACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCGTCCTTGTA 2774354 Query 110418 GAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGC 110477 | |||| | || ||||| || || ||||| | || | |||||| | ||| | | Sbjct 2774355 CAACATGAAAGGAGTACCGGTCTCAGTCTGGGCCTCCAAAATGGCGTACCACAACTTTTG 2774414 Query 110478 GGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAA 110537 ||| |||||| | | |||||| |||||| |||||| || || || Sbjct 2774415 GGCCTTGACAGTGTTTCTTCCTCTACCTTCTCTCTCGTAACGTTCGTACAACTCTTCGAA 2774474 Query 110538 TTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATT 110597 ||| | ||||| || || | | || || | || ||| |||| || | ||||| Sbjct 2774475 TTCGTCACCGTATACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCAATC 2774534 Query 110598 TCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTC 110657 || | || || ||||||||||||| ||| |||||||||| || | ||| | || Sbjct 2774535 ACCGTTTTGTTCGACTCTCTTCATGAACAAGTCTGGAATCCACAAAGCTGGGAACAAATC 2774594 Query 110658 ACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATC 110717 | | | |||||| | ||| ||||| | | || | ||||| | || || Sbjct 2774595 TCTAGCTCTAATCTCTTCCTTACCGTGGTTCTTTCTGATATCAATGAAGTCGAAAATGTC 2774654 Query 110718 CGAGTGCCATGGTTCGAGATAGACAGCGA-------TGGATCCCTTACGACGACCCGCCT 110770 | |||||||||||| | || | || | |||| | ||| || ||| | Sbjct 2774655 TGCGTGCCATGGTTCCAAGTATAAGGCAAAAGCACCTGGA-CGCTTGTTACCACCT---T 2774710 Query 110771 GGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATT 110830 ||| ||| || | || || ||||||||| | | ||| ||||| || || | |||| Sbjct 2774711 GGTCAACGTATCTAGCAGTATTATTGAAGACACGAACCATTGGAATGATACCGTTGGATG 2774770 Query 110831 GACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAA 110890 ||| || ||||| ||| || | | | |||||||| |||||| || | ||||| Sbjct 2774771 TACCGTTAGTACCAGCAATGTAGGCACCAGTAGAACGAATGTTGTGGATGTGTAAACCAA 2774830 Query 110891 TACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGA-GTGTACCATAAATACCATC 110948 ||||||| || | ||| ||| ||||| ||| | | |||| | ||||| || || Sbjct 2774831 TACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTTAAAGTGT--CGTAAATTCCGTC 2774888 Query 110949 AATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCC 111008 ||| || || |||| |||| | || || ||||||||||| || ||| || || || Sbjct 2774889 AATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTACC 2774948 Query 111009 CGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGT 111068 || ||||| | || || | | ||| |||| | || |||||||||| |||||| | Sbjct 2774949 AGCGTTGAACAAAGTTGGAGAACCGTGAGTGAAGAAACGTTGGGACATCAAGTTGTAAGA 2775008 Query 111069 GTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATA 111128 || | | | ||| | |||||| |||||||| | ||||| ||| | || || Sbjct 2775009 TTCAATGACCTTCTCGATATCATCACCGTGGATACCAATAGAAACTCTCATAATCAAATG 2775068 Query 111129 TTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTT 111188 ||| || |||| | ||| || | ||||| |||||| |||||| |||||| Sbjct 2775069 TTGTGGTCTTTCAGCAACCTTACCGTTGACACGTAAAAGGTATGATCTCTCTAAGGTCTT 2775128 Query 111189 GAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 || ||||||||| | ||| ||| |||||||| Sbjct 2775129 GAAACCAAAGTAGTTATAATTGAAGTCACGATC 2775161 >seq1 Length=3488706 Score = 91.5 bits (100), Expect = 2e-13 Identities = 273/413 (66%), Gaps = 9/413 (2%) Strand=Plus/Minus Query 11590 TCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG-A 11648 ||||||||||||||||| | | |||||| | || |||||||||||| |||| | Sbjct 1561193 TCGAAACCGTCCATTTCGACCAATAACTGGTTCAAAGTGGTTTCACGCTCATCATTGGCA 1561134 Query 11649 GGGCATACCA---CCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATAC 11705 || || || || |||||| | |||||| | ||| ||||| || || | || || Sbjct 1561133 CCGC-TAGCATTGCCCTTCGAACGTTGCTTACCAATAGCATCAATTTCGTCTACAAAAAC 1561075 Query 11706 GATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAAC 11765 || | || || ||||||| | ||| | ||||| || | || ||||| Sbjct 1561074 AATGGAAGGAGCATTTTCACGTGCAGTCTTGAACAAGTCACGGACTCTGGATGCACCAAC 1561015 Query 11766 ACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGAAT-GAAGGGAACATTAGACT 11824 ||| || ||||| || ||||| | | ||||| || || | ||| |||||| | | Sbjct 1561014 ACCAACAAACATTTCGACGAATTCAGAACCAGAA-ACAGAGTAGAATGGAACACCGGCTT 1560956 Query 11825 CACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGG 11884 ||||||| | |||| ||||| | |||||||| ||||| || | |||| | | | Sbjct 1560955 CACCAGCTGTAGCTCTAGCGATCAAGGTCTTACCAGTACCTGGGGGTCCAGACAAGATTG 1560896 Query 11885 CGCCACGGGGGATCTTGGCACC-ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCC 11943 | || | ||||| || ||||| | || | | || ||| || || | ||||| | | Sbjct 1560895 CACCTCTTGGGATTTTTGCACCTAATTTCTCA-TATTTCTCTGGATTTTGAAGGAACTTC 1560837 Query 11944 ACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 || | |||| || ||| ||||| || | | ||||| | ||||| |||| Sbjct 1560836 ACGAACTCCATAACTTCTTCCTTAGCTTCGGCCATACCAGCGACATCCTTGAA 1560784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975926378000