Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2 284 1e-71 seq3 82.4 9e-11 >seq2 Length=3116340 Score = 284 bits (314), Expect = 1e-71 Identities = 991/1518 (65%), Gaps = 63/1518 (4%) Strand=Plus/Plus Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGG 105953 |||||||||| ||| || || || | |||||| ||| |||||||| | ||||| | Sbjct 2773650 GTTGACAATCTGAAATTCACCAGCCAACACTCTTCT-AGAGTAGATGTTAGATGTGTATG 2773708 Query 105954 GTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCA 106013 ||||||| ||||| || |||||||||||||| | || ||||| ||||||||||| || | Sbjct 2773709 GTTCAAAACATTCGTTGTTACCCAAGATTTGGGAAGTTGAGGCAGTTGGCATTGGGGCGA 2773768 Query 106014 TCAAAAGACTGTTACGAAGACC---CTTTTCC--TTGATGCGTTCCTTGAGAACATCCCA 106068 ||| | | || | | ||| ||| || | ||| ||| || |||||| Sbjct 2773769 CCAACAAAGAATTTCTCAAACCGTGCTTAGCCAACTTCTGC-TTCAAGGA----ATCCCA 2773823 Query 106069 GT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGAC 106126 || | || | || |||| || | ||||||| ||| |||| | || |||||||| Sbjct 2773824 GTCCCATAACTCAG-TTGGCTT-TCTGTCCCACAAGTCATATTGTAACAATCCTTGGGAA 2773881 Query 106127 GTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGC 106185 | ||||| ||||| | | ||| || | |||| | |||||||||| | || || Sbjct 2773882 GCTGGAGAGCCCTCGTAAGACTCGTAAGGGCCTTCTTCGGCAGCCAATTCGATAG-AGGC 2773940 Query 106186 CTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATC 106245 || | || ||||||| || ||||||||||| | |||| || | || || | Sbjct 2773941 TTCAACGGCACCGTGATAGATAGTTTCAAAGATTTGGATGTTCAATTCTCTAGCCTCTTG 2774000 Query 106246 TGAATCAAATGCGTAGCGGCACAA---AATAAATACATCCGCGAGACCTTGAACACCCAA 106302 || || |||| ||| | ||| || || ||| || | |||||| |||||||| Sbjct 2774001 GGAGTCGAATG-GTA--ATCTCAATGCCATGAAGGTATCAGCCAAACCTTGGACACCCAA 2774057 Query 106303 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATT 106359 | |||| ||||||| || | | ||||| || | ||| || ||| || || | || Sbjct 2774058 AGCAATTGGTCTGTTTCTCTTGTTAGA---TCTCTCAGCTTCCGGAACTGGGTAGTAGTT 2774114 Query 106360 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 106419 ||||||||||| ||| | || || || ||| |||| ||| || | || || Sbjct 2774115 TCTGTCAATGATCTTGTTCAAGTTACGAGTGACGGACTTGGTGACTTCGTGCAACTTCTC 2774174 Query 106420 ATA-----ATCA-AAAG---TGCGAGTCTCTTCATTGACATACTTTGGAAGG----GCGA 106466 | | | || |||| ||| ||| |||| | || | |||||| || | Sbjct 2774175 AAAGTTGTACCACAAAGACTTGC-TGTC-CTTC-TCAGCAAA----GGAAGGTAAAGCAA 2774227 Query 106467 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 106526 | || ||||| || || ||||| || || | |||||||| ||||| || Sbjct 2774228 TGGAGGCCAAGTTACAGACAGCAACTTCCTCTGGGGAAGAGTACTCTACGATTTCACAAC 2774287 Query 106527 ACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCAT 106586 ||||||| ||| ||| || | ||||| ||||||||||| |||| ||||| || || | Sbjct 2774288 ACAAGTTAGAAGACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCGT 2774347 Query 106587 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC- 106645 ||||||| | |||| | || || || ||||| ||||| | || | ||| || | |||| Sbjct 2774348 CCTTGTACAACATGAAAGGAGTACCGGTCTCAGTCTGGGCCTCCAAAATGGCGTACCACA 2774407 Query 106646 ACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 106705 || | | | || | ||| || | | | || || |||||| | ||| | Sbjct 2774408 ACTTTTGGGCCTTG-ACAGTGTTTCTTCCTCTACCTTCTCTCTCGTAACGTTCGTACAAC 2774466 Query 106706 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 106765 |||| || || ||||| | || | | ||||| || | || |||| |||||||| Sbjct 2774467 TCTTCGAATTCGTCACCGTATACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGA 2774526 Query 106766 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 106825 | ||| | ||| | || || | ||||||||| | |||||||||||||| | || Sbjct 2774527 GTCCAATCACCGTTTTGTTCGACTCTCTTCATGAACAAGTCTGGAATCCACAAAGCTGGG 2774586 Query 106826 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 106885 || | ||||||| | | |||||| | ||| ||||| || | |||| ||| || Sbjct 2774587 AACAAATCTCTAGCTCTAATCTCTTCCTTACCGTGGTTCTTTCTGATATCAATGAAGTCG 2774646 Query 106886 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------ 106939 | || || ||||||||||| || | || | || | || || | ||||| Sbjct 2774647 AAAATGTCTGCGTGCCATGGTTCCAAGTATAAGGCAAAAGCACC---TGGACGCTTGTTA 2774703 Query 106940 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 106999 ||| |||| | || || | || || || || || |||| ||||||||| ||||| Sbjct 2774704 CCACCTTGGTCAACGTATCTAGCAGTATTATTGAAGACACGAACCATTGGAATGATACCG 2774763 Query 107000 TCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC 107059 | ||| ||| || || || ||| | | | | | | | |||||||| Sbjct 2774764 TTGGATGTACCGTTAGTACCAGCAATGTAGGCACCAGTAGAACGAATGTTGTGGATGTGT 2774823 Query 107060 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 107119 | |||||||| ||||| | ||| || || ||||| | | | ||| | || || Sbjct 2774824 AAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTTAAAGTGTCGTAAATT 2774883 Query 107120 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 107179 |||| || ||||| ||||| |||||| |||||| ||| ||||| || || ||| Sbjct 2774884 CCGTCAATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGG 2774943 Query 107180 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCG 107239 |||||||| ||||| | ||||| | ||||| |||| | || |||||||||| || | Sbjct 2774944 GTACCAGCGTTGAACAAAGTTGGAGAACCGTGAGTGAAGAAACGTTGGGACATCAAGTTG 2775003 Query 107240 TATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAAC 107299 || | || | ||| || || || || |||||||| || || | || | ||||| | Sbjct 2775004 TAAGATTCAATGACCTTCTCGATATCATCACCGTGGATACCAATAGAAACTCTCATAATC 2775063 Query 107300 ATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAG 107358 | | ||| ||| |||| | | || | || ||| ||| || | || |||| | Sbjct 2775064 AAATGTTGTGGTCTTTCAGCAACCTTACCGTTGACACGTAAAAGGTATGATC-TCTCTAA 2775122 Query 107359 GGTTTTGAGACCAAAGTA 107376 ||| |||| ||||||||| Sbjct 2775123 GGTCTTGAAACCAAAGTA 2775140 >seq3 Length=2759450 Score = 82.4 bits (90), Expect = 9e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 155053 GTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGGGTGTTATT 155112 || || ||| |||| ||| | || | || || |||||| |||||| |||||| | Sbjct 260325 GTCGCCCCAAGATCTGGTTTGGCCGCAAAACACGGTATTTCCACTGGTGCTGGTGTTGTG 260384 Query 155113 GATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACAAAGACTTT 155172 ||| | ||||| | ||| || ||||| || |||| ||||| ||| |||||||||||| Sbjct 260385 GATGCTGACTACAGAGGAGAGGTCAAGGTTATTCTTTTCAACCACTCCGACAAAGACTTT 260444 Query 155173 GAGGTAAAGAAAGGGGATCGCATCGCACAA 155202 | || |||| |||||| | || || ||| Sbjct 260445 GCTGTCGAGAAGGGGGATAGAATTGCCCAA 260474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980726252400