Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2 102 1e-16 >seq2 Length=3116340 Score = 102 bits (112), Expect = 1e-16 Identities = 192/280 (69%), Gaps = 2/280 (1%) Strand=Plus/Minus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481 ||||||||| | |||| | || || || ||| |||| | || ||||| || |||||| Sbjct 1442553 GACATTGCTTTGGGTACTTCCCAGAGATTCGGTGTTCCATTCGGTTACGGTGGACCTCAT 1442494 Query 158482 GCTGCATTCTT-TGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540 ||||| ||||| | || |||| ||||| |||||||| || || ||||| || || Sbjct 1442493 GCTGCGTTCTTCTCCACTAACA-TGAAGTACTCAAGAAAGATTCCAGGAAGAATCGTCGG 1442435 Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600 || ||||| ||| || |||| |||||| || ||||||| ||||| || Sbjct 1442434 AGTTTCCAAGGATAGATTAGGAAACCCAGCACTCAGATTGGCCTTACAGACCAGAGAACA 1442375 Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660 || || | ||||| || || ||| ||||| || || || ||||| | |||| || Sbjct 1442374 ACACATTAAGAGAGAAAAGGCTACCTCCAACATTTGTACTGCTCAAGCTTTATTGGCCAA 1442315 Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGA 158700 || ||| | || |||| || |||||| |||| ||| Sbjct 1442314 CATCGCTGCTATGTACGCAGTTTACCATGGTCCAGAAGGA 1442275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051126493600