Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq8 109 4e-19 >seq8 Length=506948 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| ||||| |||||||||||||||| ||| ||| || || ||||| ||||| ||| Sbjct 222652 CCTCCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 222593 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || ||| | || |||| || || || ||||| || | || ||| |||||| | || Sbjct 222592 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 222533 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| ||||| || ||| | || | ||| || |||||| Sbjct 222532 ATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATAGTGTCAGAGGACTCAACT 222473 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| ||| || || || || || | |||||| || || || |||||| Sbjct 222472 TCGAGGGTGATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATA 222425 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| || ||||||||||||| ||| ||| || || ||||| ||||| ||| Sbjct 221740 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAA 221681 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || ||| | || |||| || || || || || |||| ||||| |||||| | || Sbjct 221680 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGTTGTTGGTCTGGTGGA 221621 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || ||||| || ||||| |||||| | || | ||| | ||||| Sbjct 221620 ATACCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACT 221561 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | ||| ||||| || || || | ||||| || ||||| ||||| || Sbjct 221560 TCCAAGGTAATGGTCTTACCGGTCAATGTCTTAACGAAGATTTGCATGTT 221511 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| || ||||||||||||| ||| ||| || || ||||| ||||| ||| Sbjct 221968 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAA 221909 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || ||| | || |||| || || || || || |||| ||||| |||||| | || Sbjct 221908 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGTTGTTGGTCTGGTGGA 221849 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| ||||| |||||| | || | ||| | || || Sbjct 221848 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCGACT 221789 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || || || || || || | |||||| || || || |||||| Sbjct 221788 TCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 221741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633560435280