Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq8 149 5e-31 >seq8 Length=506948 Score = 149 bits (164), Expect = 5e-31 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | |||||| || ||||| || ||||| ||||| || ||||| |||| Sbjct 221740 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAA 221681 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || |||||||||||||| || || || ||||| ||||| || || ||| Sbjct 221680 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGTTGTTGGTCTGGTGGA 221621 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| |||||||| || || || || | || | ||||||||| | ||| ||| Sbjct 221620 ATACCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACT 221561 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTA 101474 || | || | || || ||||| || || || || || || |||||| ||| Sbjct 221560 TCCAAGGTAATGGTCTTACCGGTCAATGTCTTAACGAAGATTTGCATGTTTA 221509 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | |||||| || ||||| || ||||| ||||| || ||||| |||| Sbjct 221968 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAA 221909 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || |||||||||||||| || || || ||||| ||||| || || ||| Sbjct 221908 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGTTGTTGGTCTGGTGGA 221849 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || || | || | |||||||| | ||| ||| Sbjct 221848 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCGACT 221789 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| | || || || || ||||| || || || || ||||| Sbjct 221788 TCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221742 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || | ||||| || ||||| || ||||| ||||| || ||||| || | Sbjct 222652 CCTCCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 222593 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || |||||||||||||| ||||| ||||| | ||||| || || ||| Sbjct 222592 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 222533 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || || | || | ||||||||| | || ||| Sbjct 222532 ATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATAGTGTCAGAGGACTCAACT 222473 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || || ||||| ||||| || || || || ||||| Sbjct 222472 TCGAGGGTGATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 222426 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | ||| || || ||||| || ||||| ||||| || ||||| || | Sbjct 222196 CCACCTCTCAATCTTAATACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 222137 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || |||||||||||||| ||||| ||||| | ||||| || || ||| Sbjct 222136 AAGGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 222077 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || || | || | |||||||| | ||| ||| Sbjct 222076 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCAACT 222017 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| | || || || || ||||| || || || || ||||| Sbjct 222016 TCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221970 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | |||||| || ||||| || ||||| ||||| || ||||| || | Sbjct 222424 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 222365 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || || ||||||||||| || || ||||| | ||||| || || ||| Sbjct 222364 AAGGTTCTGCCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 222305 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || || | || | ||||||||| | || ||| Sbjct 222304 ATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATAGTGTCAGAGGACTCGACT 222245 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| | || || || || || || || || || || ||||| Sbjct 222244 TCAAGAGTAATAGTCTTACCAGTCAAGGTCTTGACGAAAATTTGCAT 222198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278351703570