Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq2 116 7e-21
seq1 107 4e-18
>seq2
Length=3116340
Score = 116 bits (128), Expect = 7e-21
Identities = 371/566 (66%), Gaps = 27/566 (5%)
Strand=Plus/Minus
Query 25480 TGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCC 25539
||| | ||||||||||||||| || ||| ||||||||||||||| || || ||
Sbjct 2726993 TGGCAAATGTACAAGAAGGCTGAAGCCTCCTTCTGGACCGCCGAAGAAATCGACTTGAGT 2726934
Query 25540 AAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGC---AGCATTTTC---TCAAG 25593
||||| | | |||| || | | | || | || | || ||| || |
Sbjct 2726933 AAGGATACCACTGACTGGAAC-CACAAGTTGAACAAGAACGAAAGATACTTCATTTCCCG 2726875
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|| | ||||| ||||| || |||||||||||||| || |||||||| || ||||
Sbjct 2726874 TA--TCTTGGCTTTCTTCGCCGCCTCTGATGGTATTGTCAACGAGAACTTGGTTGAGAAC 2726817
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
||| | ||||| || | || ||||||||||||||||||||||| || ||
Sbjct 2726816 TTCTCTGCTGAAGTCCAAATCCCAGAAGCCAAGTGTTTCTACGGTTTCCAAATTATGATG 2726757
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGA--TGACG--TACATTACAGACGT 25769
||||| | ||||||||| || | || | | |||| ||| ||| |||
Sbjct 2726756 GAAAACATTCACTCTGAGACATACTCT----TTATTAATTGACACTTACGTTAAGGAC-- 2726703
Query 25770 CGCCGAGAGAGATCGGCTGTTTGGT----GCCATCGAGCACATACCCAGCATCAAGAGGA 25825
|| | || || || | | |||||||| |||| || | |||| | ||
Sbjct 2726702 --CCTAAGGAAGCCGACTTCCTTTTCAACGCCATCGACAACATTCCATGTATCAGAAAGA 2726645
Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGG 25885
|||| |||||| ||| |||||| | | || ||| || ||| | | |
Sbjct 2726644 AGGCTGACTGGGCCTTGAGATGGATCTCTGACGATGAAGCCTTGTTCGGTGAGAGATTAG 2726585
Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945
|||| || |||||||| ||||| ||||||||||| || || || || | |||||||||
Sbjct 2726584 TAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCCTTCGCTTCTATCTTCTGGT 2726525
Query 25946 TCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGAC 26004
| ||| ||| || ||||| || || ||||| |||||||| | ||| | || |||
Sbjct 2726524 TGAAGAAGAGAGGTTTAATGCCAGGTTTG-ACTTTCTCCAACGAATTGATCTGTAGAGAC 2726466
Query 26005 GAGGGTCTCCACAGAGATTTTGCCTG 26030
|| ||| | |||| || || |||||
Sbjct 2726465 GAAGGTTTACACACCGACTTCGCCTG 2726440
>seq1
Length=3488706
Score = 107 bits (118), Expect = 4e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 222023 TTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTG 222082
|||| ||||||||||| |||||| | ||||| ||||| || | ||| | |||||
Sbjct 3155093 TTGTTTTTGACCCTCTCCATGAATAAATCCGGAATCCATAGACCAAAAAACAAATCTCGC 3155034
Query 222083 GTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCG 222142
|||| ||||||| ||||| ||| ||| ||| |||||| | ||||| | |||||
Sbjct 3155033 GTCCTGAGCTCCTCTTTGCCGTGGTTCTTCTTCAAATCCAAGATTTCAAAGACGTCAGAA 3154974
Query 222143 TGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201
||||| ||||| | ||| | || | ||| || |||| ||||| || || ||||||||
Sbjct 3154973 TGCCATGGCTCTAAATATATAGCAAAAGCTCCTGGTCTTTTGTTCCCTCCTTGATCCAC 3154915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844683894400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |