Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 116 7e-21 seq1 107 4e-18 >seq2 Length=3116340 Score = 116 bits (128), Expect = 7e-21 Identities = 371/566 (66%), Gaps = 27/566 (5%) Strand=Plus/Minus Query 25480 TGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCC 25539 ||| | ||||||||||||||| || ||| ||||||||||||||| || || || Sbjct 2726993 TGGCAAATGTACAAGAAGGCTGAAGCCTCCTTCTGGACCGCCGAAGAAATCGACTTGAGT 2726934 Query 25540 AAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGC---AGCATTTTC---TCAAG 25593 ||||| | | |||| || | | | || | || | || ||| || | Sbjct 2726933 AAGGATACCACTGACTGGAAC-CACAAGTTGAACAAGAACGAAAGATACTTCATTTCCCG 2726875 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | ||||| ||||| || |||||||||||||| || |||||||| || |||| Sbjct 2726874 TA--TCTTGGCTTTCTTCGCCGCCTCTGATGGTATTGTCAACGAGAACTTGGTTGAGAAC 2726817 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 ||| | ||||| || | || ||||||||||||||||||||||| || || Sbjct 2726816 TTCTCTGCTGAAGTCCAAATCCCAGAAGCCAAGTGTTTCTACGGTTTCCAAATTATGATG 2726757 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGA--TGACG--TACATTACAGACGT 25769 ||||| | ||||||||| || | || | | |||| ||| ||| ||| Sbjct 2726756 GAAAACATTCACTCTGAGACATACTCT----TTATTAATTGACACTTACGTTAAGGAC-- 2726703 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGT----GCCATCGAGCACATACCCAGCATCAAGAGGA 25825 || | || || || | | |||||||| |||| || | |||| | || Sbjct 2726702 --CCTAAGGAAGCCGACTTCCTTTTCAACGCCATCGACAACATTCCATGTATCAGAAAGA 2726645 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGG 25885 |||| |||||| ||| |||||| | | || ||| || ||| | | | Sbjct 2726644 AGGCTGACTGGGCCTTGAGATGGATCTCTGACGATGAAGCCTTGTTCGGTGAGAGATTAG 2726585 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 |||| || |||||||| ||||| ||||||||||| || || || || | ||||||||| Sbjct 2726584 TAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCCTTCGCTTCTATCTTCTGGT 2726525 Query 25946 TCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGAC 26004 | ||| ||| || ||||| || || ||||| |||||||| | ||| | || ||| Sbjct 2726524 TGAAGAAGAGAGGTTTAATGCCAGGTTTG-ACTTTCTCCAACGAATTGATCTGTAGAGAC 2726466 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTG 26030 || ||| | |||| || || ||||| Sbjct 2726465 GAAGGTTTACACACCGACTTCGCCTG 2726440 >seq1 Length=3488706 Score = 107 bits (118), Expect = 4e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 222023 TTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTG 222082 |||| ||||||||||| |||||| | ||||| ||||| || | ||| | ||||| Sbjct 3155093 TTGTTTTTGACCCTCTCCATGAATAAATCCGGAATCCATAGACCAAAAAACAAATCTCGC 3155034 Query 222083 GTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCG 222142 |||| ||||||| ||||| ||| ||| ||| |||||| | ||||| | ||||| Sbjct 3155033 GTCCTGAGCTCCTCTTTGCCGTGGTTCTTCTTCAAATCCAAGATTTCAAAGACGTCAGAA 3154974 Query 222143 TGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 ||||| ||||| | ||| | || | ||| || |||| ||||| || || |||||||| Sbjct 3154973 TGCCATGGCTCTAAATATATAGCAAAAGCTCCTGGTCTTTTGTTCCCTCCTTGATCCAC 3154915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844683894400