Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2 168 3e-37 >seq2 Length=3116340 Score = 168 bits (186), Expect = 3e-37 Identities = 295/424 (70%), Gaps = 4/424 (1%) Strand=Plus/Plus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 |||||| |||| | | ||||||| | ||||| || ||| ||| ||| || || |||||| Sbjct 2774512 TTTGGAGAGAAAAGAGTCCAATCACCGTTTTGTTCGACTCTCTTCATGAACAAGTCTGGA 2774571 Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008 ||||||| || || |||||||| ||||| || ||||| || ||||| |||||| | Sbjct 2774572 ATCCACAAAGCTGGGAACAAATCTCTAGCTCTAATCTCTTCCTTACCGTGGTTCTTTCTG 2774631 Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCT 26068 | ||| | ||| || ||||| |||| |||||||||||| || || | |||||| |||| Sbjct 2774632 ATATCAATGAAGTCGAAAATGTCTGCGTGCCATGGTTCCAAGTATAAGGCAAAAGCACCT 2774691 Query 26069 TTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATT 26128 | || |||||||| || |||||||| ||||| | |||||| || | |||| Sbjct 2774692 GGACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTATTATTGAAGACACGAACCATT 2774751 Query 26129 GGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187 |||| | || | |||| | | ||||| || | | ||| | || || || || | ||| Sbjct 2774752 GGAA-TGATACCGTTGGATGTACCGTTAGTACCAGCAATGTAGGCACCAGTAGAACGAAT 2774810 Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAAA 26246 | ||| || | ||| || |||||||| | || ||||| ||||| ||| || Sbjct 2774811 GTTGTGGATGTGTAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTTAA 2774870 Query 26247 CTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATA 26306 || ||| ||||||| | || || | ||||| | | | ||||||||||| | Sbjct 2774871 -AGTGTCGTAAATTCCGTCAATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGAAGACA 2774929 Query 26307 ATTG 26310 ||| Sbjct 2774930 TTTG 2774933 Score = 100 bits (110), Expect = 1e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTC 25074 |||||| |||| ||| |||||||| | | ||| || ||| |||||||||||||||| Sbjct 2773662 AAATTCACCAGCCAACACTCTTCTAGAGTAGATGTTAGATGTGTATGGTTCAAAACATTC 2773721 Query 25075 ATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATT 25134 || || || |||||||| ||||| || || ||||||||| || | || | ||||| Sbjct 2773722 GTTGTTACCCAAGATTTGGGAAGTTGAGGCAGTTGGCATTGGGGCGACCAACAAAGAATT 2773781 Query 25135 TCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179 ||||||||| | ||| | | || || || || |||||| || Sbjct 2773782 TCTCAAACCGTGCTTAGCCAACTTCTGCTTCAAGGAATCCCAGTC 2773826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039969160750