Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 4e-15 >seq2 Length=3116340 Score = 96.9 bits (106), Expect = 4e-15 Identities = 191/280 (68%), Gaps = 2/280 (1%) Strand=Plus/Plus Query 139262 TCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGC 139321 ||| |||| |||||| || |||| || | ||| || || || | | ||||| || Sbjct 1442275 TCCTTCTGGACCATGGTAAACTGCGTACATAGCAGCGATGTTGGCCAATAAAGCTTGAGC 1442334 Query 139322 TGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGC 139381 || || ||||| ||| || || ||||| |||| || || ||||| || |||| || Sbjct 1442335 AGTACAAATGTTGGAGGTAGCCTTTTCTCTCTTAATGTGTTGTTCTCTGGTCTGTAAGGC 1442394 Query 139382 TAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTAT 139441 |||||| ||| || || ||| || ||| || || || ||||| || || || Sbjct 1442395 CAATCTGAGTGCTGGGTTTCCTAATCTATCCTTGGAAACTCCGACGATTCTTCCTGGAAT 1442454 Query 139442 CTTTCTCTTATACTTGTCTGTTGTTGCA-AAGAATGCAGCATGAGGACCTCCGTATCCCA 139500 |||||| ||||| |||| || | ||||| ||||||||||| || ||||| || | Sbjct 1442455 CTTTCTTGAGTACTTCA-TGTTAGTGGAGAAGAACGCAGCATGAGGTCCACCGTAACCGA 1442513 Query 139501 TAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 |||| ||| || || || | |||| | |||||| || Sbjct 1442514 ATGGAACACCGAATCTCTGGGAAGTACCCAAAGCAATGTC 1442553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998327625200