Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2 288 1e-72 seq3 82.4 9e-11 >seq2 Length=3116340 Score = 288 bits (318), Expect = 1e-72 Identities = 988/1514 (65%), Gaps = 55/1514 (4%) Strand=Plus/Minus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204 ||||||||| |||| ||| | |||| || | || ||| ||| || | || | | Sbjct 2775140 TACTTTGGTTTCAAGACCTTAGAGA-GATCATACCTTTTACGTGTCAACGGTAAGGTTGC 2775082 Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264 |||| ||||| | || | ||| | || | || || |||||||| || || || || Sbjct 2775081 TGAAAGACCACAACATTTGATTATGAGAGTTTCTATTGGTATCCACGGTGATGATATCGA 2775022 Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAAC 75324 ||| | || | ||| || |||||||||| || | |||| ||||| | ||||| Sbjct 2775021 GAAGGTCATTGAATCTTACAACTTGATGTCCCAACGTTTCTTCACTCACGGTTCTCCAAC 2774962 Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384 | ||||| |||||||| ||| || || ||||| ||| |||||| |||||| || Sbjct 2774961 TTTGTTCAACGCTGGTACCCCATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCCATGAA 2774902 Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444 ||| ||||| || |||| || || | ||| | | | ||||| || || ||| | Sbjct 2774901 GGACGACTCTATTGACGGAATTTACGACACTTTAAAGACCTGTGCCTTGATTTCCAAGAG 2774842 Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504 ||||| |||||||| | |||||||| | | | | | | | ||| || Sbjct 2774841 TGCTGGTGGTATTGGTTTACACATCCACAACATTCGTTCTACTGGTGCCTACATTGCTGG 2774782 Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || || ||| ||| | ||||| ||||||||| |||| || || || || || | Sbjct 2774781 TACTAACGGTACATCCAACGGTATCATTCCAATGGTTCGTGTCTTCAATAATACTGCTAG 2774722 Query 75565 CTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACC 75618 || || | |||| || ||||| ||| | | | || | ||||||||||| Sbjct 2774721 ATACGTTGACCAAGGTGGTAACAAGCGTCC--AGGTG-CTTTTGCCTTATACTTGGAACC 2774665 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 |||||| || || || | || ||| |||| | || ||||| ||| | |||||| Sbjct 2774664 ATGGCACGCAGACATTTTCGACTTCATTGATATCAGAAAGAACCACGGTAAGGAAGAGAT 2774605 Query 75679 TCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 | | ||||||| | || || | |||||||||||||| | ||||||||| | || || Sbjct 2774604 TAGAGCTAGAGATTTGTTCCCAGCTTTGTGGATTCCAGACTTGTTCATGAAGAGAGTCGA 2774545 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798 | ||| | ||| ||||||||| |||| || | || ||||| | | || | Sbjct 2774544 ACAAAACGGTGATTGGACTCTTTTCTCTCCAAACGAAGCTCCAGGCTTGCCAGAAGTATA 2774485 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG-GAGGGTAGAGCCAATGCGA 75857 ||||| || || |||| | ||| | || || ||| || ||||||| | | Sbjct 2774484 CGGTGACGAATTCGAAGAGTTGTACGAACGTTACGA-GAGAGAAGGTAGAGGAAGAAACA 2774426 Query 75858 CTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 |||| | || | | | ||| ||| | || ||| | | | ||||| ||||| || || Sbjct 2774425 CTGT-CAAGGCCCAAAAGTTGTGGTACGCCATTTTGGAGGCCCAGACTGAGACCGGTACT 2774367 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 || | ||| | |||||||| || ||||||||||||| ||||||||||| ||||| | | Sbjct 2774366 CCTTTCATGTTGTACAAGGACGCCTGTAACAAGAAGACCAACCAAAAGAACTTGGGTATA 2774307 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 |||||| || || | || ||||| |||||||| | || || ||| Sbjct 2774306 ATCAAGTCTTCTAACTTGTGTTGTGAAATCGTAGAGTACTCTTCCCCAGAGGAAGTTGCT 2774247 Query 76037 GTTTGCAATTTGGCATCAATCGC----CCTTCCAAAGTATGTCAATGAAGAGACTCGCA- 76091 || || || ||||| || || || |||||| | || | |||| ||| ||| Sbjct 2774246 GTCTGTAACTTGGCCTCCATTGCTTTACCTTCC----TTTGCTGA-GAAG-GACA-GCAA 2774194 Query 76092 --CTTT-TGAT-----TATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCT 76143 |||| || | | ||| || | || ||| |||| ||| || || || | Sbjct 2774193 GTCTTTGTGGTACAACTTTGAGAAGTTGCACGAAGTCACCAAGTCCGTCACTCGTAACTT 2774134 Query 76144 AAACCGAGTCATTGACAGAAATTTTTATCCCGTT---GAGACTGCGCGAAAGTCTAATAT 76200 ||| ||||||||||||| | || || ||| || ||| | || ||||| | Sbjct 2774133 GAACAAGATCATTGACAGAAACTACTACCCAGTTCCGGAAGCTGAGAGA---TCTAACAA 2774077 Query 76201 GCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT---TTGTG 76257 | || ||||||| |||| ||||||||| |||||| | || ||| || || ||| | Sbjct 2774076 GAGAAACAGACCAATTGCTTTGGGTGTCCAAGGTTTGGCTGATACCTTCATGGCATTGAG 2774017 Query 76258 CCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCAT 76317 ||| |||| || || | || || | || |||| | ||||||||||| || Sbjct 2774016 AT--TAC-CATTCGACTCCCAAGAGGCTAGAGAATTGAACATCCAAATCTTTGAAACTAT 2773960 Query 76318 GTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGAC 76377 ||||||| || | || || | |||||||||| | |||| | || ||| | Sbjct 2773959 CTATCACGGTGCCGTTGAAGCCTCTATCGAATTGGCTGCCGAAGAAGGCCCTTACGAGTC 2773900 Query 76378 ATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAAC 76437 | ||||| ||||| || |||||||| || | || | ||| ||||||| | || | Sbjct 2773899 TTACGAGGGCTCTCCAGCTTCCCAAGGATTGTTACAATATGACTTGTGGGACAGA-AAGC 2773841 Query 76438 CAAGCTCAACTACG--ACTGGGATGTTCTCAAG--GAACGCATCAAGGAGAAGGGTCTTC 76493 ||| || | || | |||||||| | ||| ||| | | || | ||| | Sbjct 2773840 CAA-CTGAGTTATGGGACTGGGATTCCTTGAAGCAGAAGTTGGCTA--AGCACGGTTTGA 2773784 Query 76494 GTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATA 76553 | || | | ||| | || ||||||||||| ||||| || | |||||||||||||| | Sbjct 2773783 GAAATTCTTTGTTGGTCGCCCCAATGCCAACTGCCTCAACTTCCCAAATCTTGGGTAACA 2773724 Query 76554 ATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGT 76613 | ||||| ||||||||||||||| | ||||||||| |||||| | || ||||| | Sbjct 2773723 ACGAATGTTTTGAACCATACACATCTAACATCTACTCTAGAAGAGTGTTGGCTGGTGAAT 2773664 Query 76614 TTGTCATTGTCAAC 76627 || ||||||||| Sbjct 2773663 TTCAGATTGTCAAC 2773650 >seq3 Length=2759450 Score = 82.4 bits (90), Expect = 9e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 27873 TTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAAC 27932 ||| || || | |||||| |||| || ||||||||||||| ||| ||||| |||| Sbjct 260474 TTGGGCAATTCTATCCCCCTTCTCGACAGCAAAGTCTTTGTCGGAGTGGTTGAAAAGAAT 260415 Query 27933 GACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACCAACTTGAATACCATG 27992 || ||||| || ||| | ||||| | ||| | |||||| |||||| |||||| || Sbjct 260414 AACCTTGACCTCTCCTCTGTAGTCAGCATCCACAACACCAGCACCAGTGGAAATACCGTG 260355 Query 27993 CTTCACAGCGAGACCGGATCGTGGTGCAAC 28022 || | || | ||| |||| ||| || || Sbjct 260354 TTTTGCGGCCAAACCAGATCTTGGGGCGAC 260325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569525428800