Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq2 159 5e-34
seq8 143 4e-29
seq6 98.7 1e-15
>seq2
Length=3116340
Score = 159 bits (176), Expect = 5e-34
Identities = 560/859 (65%), Gaps = 30/859 (3%)
Strand=Plus/Plus
Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920
|| |||| ||| || | |||| | ||||||||||| || ||||| || | || || ||
Sbjct 2726146 GCCTTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATG 2726205
Query 17921 AAATTCATAAAATCAAATGGATTAGTGGTTTTATA-ATATTTTTCTTGTATTAATTCGTA 17979
| ||| || || ||||| || ||| || || | || || ||| || |
Sbjct 2726206 TTCTCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTGCCCAAAGCAATC 2726265
Query 17980 TAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAG 18039
|||||||| || || || || ||||| ||||| ||||||| ||| ||||| ||||
Sbjct 2726266 -AATAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAA 2726324
Query 18040 TAGTCTGAAA--GGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTT 18097
|| |||| || | ||||||| | | ||||||| ||| |||| |||| || |
Sbjct 2726325 TAAG--GAAACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTA 2726382
Query 18098 ATTATGTTTATTACCCTAGAT---TTTGGCAATTTATTAATTATGTGATTATAATATAAT 18154
|| || || || || | | ||| | | || | |||| | | ||
Sbjct 2726383 ATGATCTTCTCAACAATAACTGGGTCTGG---TCTGTTTTGCAAGTGAG---AGAACAAC 2726436
Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214
||||| || || || |||||||||||||| ||||| | || |||||||| || ||
Sbjct 2726437 AAACAGGCGAAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTC 2726496
Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGA---AACTACTAGAA 18271
|| || ||||||| |||||| || || | ||| || || || |||| | | ||| |||
Sbjct 2726497 AAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACT-GAA 2726555
Query 18272 AAGAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATT 18330
| || ||||||||||| ||| ||||| |||| |||||| ||| | || | || ||
Sbjct 2726556 A--AAGATACCCTCAACAGCA-GCGAAAGCTACTAATCTCTCACCGAACAAGGCTTCATC 2726612
Query 18331 GCTCAG-TATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTA 18389
| |||| |||||| | ||||| || | | ||||| || || | || |
Sbjct 2726613 G-TCAGAGATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTGTCGA 2726671
Query 18390 TAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAG 18449
| || || || | || ||| || | || || | |||||||| ||||| ||||
Sbjct 2726672 TGGCGTTGAAAAGGAAGTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAATAAAG 2726731
Query 18450 AATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCT 18509
| || | ||||| || ||| ||||||| || || |||| || || | | || |
Sbjct 2726732 AGTATGTCTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTT 2726791
Query 18510 C-GGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCA 18568
| ||||| ||| | || | | || | || ||||| ||||| || || ||||| |||
Sbjct 2726792 CTGGGAT-TTGGACTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCATCA 2726850
Query 18569 GCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATT- 18627
| | ||||| || ||||| | | |||||| | | |||| || | || | ||
Sbjct 2726851 GAGGCGGCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTCAACTTG 2726910
Query 18628 --GTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGAT 18685
|||||| ||| |||| || | || | |||||| | ||||| || || | |
Sbjct 2726911 TGGTTCCAGTCAGTGGTATCCTTACTCAAGTCGATTTCTTCGGCGGTCCAGAAGGAGGCT 2726970
Query 18686 TCGGCCTGTTTGTACATTT 18704
|| |||| ||||||||||
Sbjct 2726971 TCAGCCTTCTTGTACATTT 2726989
>seq8
Length=506948
Score = 143 bits (158), Expect = 4e-29
Identities = 171/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || || |||||||| || |||||||| | |||||||| |||
Sbjct 222198 ATGCAAATTTTCGTCAAGACCTTGACTGGTAAGACTATTACTCTTGAAGTCGAGTCCTCT 222257
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| || || || ||||| || ||||| || || ||||| |||
Sbjct 222258 GACACTATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222317
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||||||||||| | ||||| |||||| ||||| || || |
Sbjct 222318 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGCAGAACCTTATCTGACTACA-- 222375
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| || | || ||||| || || |||||||| ||||| |||
Sbjct 222376 ACATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGGT 222425
Score = 140 bits (154), Expect = 5e-28
Identities = 170/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || || |||||||| || |||||||| | ||||| ||| ||||
Sbjct 221970 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTTGAATCTTCT 222029
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||||| || || || ||||| || ||||| || || ||||| |||
Sbjct 222030 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222089
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | ||| |||||||| | ||||| |||||| ||||| || || |
Sbjct 222090 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACCTTATCTGACTACA-- 222147
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| || | || ||||| || || |||||||| ||||| |||
Sbjct 222148 ACATCCAAAAGGAATCCACTCTTCACTTGGTATTAAGATTGAGAGGTGGT 222197
Score = 113 bits (124), Expect = 7e-20
Identities = 164/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || || ||||| || || ||||| || | ||||| || |||
Sbjct 222426 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATCACCCTCGAAGTTGAGTCCTCT 222485
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| || || || ||||| || ||||| || || ||||| |||
Sbjct 222486 GACACTATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222545
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | ||| |||||||| | ||||| |||||| | || || || |
Sbjct 222546 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACA-- 222603
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| || | || ||||| || || || ||||| ||||| |||
Sbjct 222604 ACATCCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGAGGT 222653
>seq6
Length=1682205
Score = 98.7 bits (108), Expect = 1e-15
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
||||||||||| || | || || || ||||| || || ||||| || ||||||||
Sbjct 47113 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTGGAAGTCGAGTCC 47172
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | ||| || || || || || || || || ||||| || || || ||
Sbjct 47173 TCCGACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATTCCACCTGAC 47232
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | || ||||||||| | ||||| |||||| | || || ||
Sbjct 47233 CAACAAAGATTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACTCTTTCTGACTAC 47292
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
|| || || || | || | || || || |||||||| ||||| ||||
Sbjct 47293 AACATCCAGAAGGAATCCACCTTGCACTTGGTCTTAAGATTGAGAGGTGGTG 47344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871908516000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |