Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq8 141 2e-28
seq6 125 1e-23
seq2 122 2e-22
>seq8
Length=506948
Score = 141 bits (156), Expect = 2e-28
Identities = 176/240 (73%), Gaps = 1/240 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || ||| || || || | ||| | || || || || || ||
Sbjct 221743 ATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCG 221684
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || || |||| |||||||| |||||||| || ||||| | |||||||| |||
Sbjct 221683 GAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGTTGTTGGTCTGGT 221624
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| || || || || || ||||| || || |||||
Sbjct 221623 GGAATACCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCA 221564
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT-TTTATTATA 172078
||||| | |||||||| ||||| || ||||| |||| ||| || ||||| |||||||||
Sbjct 221563 ACTTCCAAGGTAATGGTCTTACCGGTCAATGTCTTAACGAAGATTTGCATGTTTATTATA 221504
Score = 140 bits (154), Expect = 6e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || |||||| || || | ||| | || || || || || ||
Sbjct 222199 ATACCACCTCTCAATCTTAATACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCA 222140
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||| | || |||| |||||||| ||||||||||| || ||||| |||||||| |||
Sbjct 222139 GATAAGGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGT 222080
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || || || || || || || || |||||
Sbjct 222079 GGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCA 222020
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| |||||||| || |||||||| || || || | ||| || |||||
Sbjct 222019 ACTTCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221970
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || ||| || || || | ||| | || || || || || ||
Sbjct 222427 ATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCA 222368
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||| | || |||| || ||||| ||||| || ||||| ||||| |||||||| |||
Sbjct 222367 GATAAGGTTCTGCCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGT 222308
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || || || || ||||| || || || ||
Sbjct 222307 GGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATAGTGTCAGAGGACTCG 222248
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| |||||||| || |||||||| || || || | ||| || |||||
Sbjct 222247 ACTTCAAGAGTAATAGTCTTACCAGTCAAGGTCTTGACGAAAATTTGCAT 222198
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || ||| || || || | ||| | || || || || || ||
Sbjct 221971 ATACCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCG 221912
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || || |||| |||||||| |||||||| || ||||| | |||||||| |||
Sbjct 221911 GAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATTAAACGTTGTTGGTCTGGT 221852
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || || || || || || || || |||||
Sbjct 221851 GGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCG 221792
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| |||||||| || |||||||| || || || | ||| || |||||
Sbjct 221791 ACTTCAAGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 221742
Score = 105 bits (116), Expect = 1e-17
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||| ||||| | || || || || || | ||| | || || || || || || ||
Sbjct 222653 ACCTCCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGA 222594
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| || || |||| |||||||| ||||||||||| || ||||| |||||||| |||||
Sbjct 222593 AAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 222534
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| ||||| || ||||| || || || || || ||||| || || || || ||
Sbjct 222533 AATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCAATAGTGTCAGAGGACTCAAC 222474
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||| || || || || ||||| || || || || | ||| || |||||
Sbjct 222473 TTCGAGGGTGATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 222426
>seq6
Length=1682205
Score = 125 bits (138), Expect = 1e-23
Identities = 176/247 (71%), Gaps = 0/247 (0%)
Strand=Plus/Minus
Query 171826 TTTTTAGTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAG 171885
||||| ||| || ||||||||| | || ||| || || || || || | || ||
Sbjct 47359 TTTTTCTCTTCTTACCACCACCTCTCAATCTTAAGACCAAGTGCAAGGTGGATTCCTTCT 47300
Query 171886 AAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATC 171945
|| || || || || | || || |||| ||||| || |||||||| || || ||||
Sbjct 47299 GGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAAGATCAATC 47240
Query 171946 TCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAG 172005
| |||||||||||||| || ||||| || || || || || || ||||| || |
Sbjct 47239 TTTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGG 47180
Query 172006 TATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCT 172065
| || || || || ||||| | |||||||| ||||||||||| || || | ||| || |
Sbjct 47179 TGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTT 47120
Query 172066 GCATTTT 172072
|||||||
Sbjct 47119 GCATTTT 47113
>seq2
Length=3116340
Score = 122 bits (134), Expect = 2e-22
Identities = 356/542 (66%), Gaps = 15/542 (3%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| ||| ||| | || ||||| ||||| || || || |||| || ||
Sbjct 2726149 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTC 2726208
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATA-ATATTTTTCT--CCTATCAATACATAT 38948
| ||| || || ||||| || || || || | || || | || ||| ||
Sbjct 2726209 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTGCC---CAAAGCAATC 2726265
Query 38949 AATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008
|||||||| ||||| || || || || ||||| |||| ||||| ||||| || |||
Sbjct 2726266 AATAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAAT 2726325
Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 39068
|| || ||| || |||||| | ||||||| || || | ||||||| ||||
Sbjct 2726326 AAGGAAACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTAATG 2726385
Query 39069 atcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACAT 39128
||| | | | || | | | | | || | ||| | | | |||||
Sbjct 2726386 ATCTTCTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGA---GAGAACAACAAACAG 2726442
Query 39129 GCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 39188
|| || || || |||||||||||||| ||| | || ||||| || ||||| || |||
Sbjct 2726443 GCGAAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCT 2726502
Query 39189 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAA---AACTACTAGAAAAGAAT 39245
|||||||| |||||||| || | ||| || || || || | | | ||| |||| ||
Sbjct 2726503 GGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACT-GAAA--AAG 2726559
Query 39246 ATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAA 39305
|||||||| ||| || || |||| || ||| | || |||| || ||| || |
Sbjct 2726560 ATACCCTCAACAGCAGCGAAAGCTACTAATCTCTCACCGAACAAGGCTTCATCGTCAGAG 2726619
Query 39306 ATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTA 39365
||||| | | |||||| || || || ||| ||||| | || || || || || || ||
Sbjct 2726620 ATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTGTCGATGGCGTTG 2726679
Query 39366 AA 39367
||
Sbjct 2726680 AA 2726681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135886858000
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