Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq3 104 3e-17 >seq3 Length=2759450 Score = 104 bits (114), Expect = 3e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 172428 ACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGT 172487 || ||| | ||| ||| | ||| | |||||| ||| | ||| | | || || |||||| Sbjct 1497892 ACAGATGCCAAATTATTGAGTGAAAAAGGTGTAAAAATCTGGGAAGGAAACGGATCTCGT 1497951 Query 172488 GAATTTTTAGATTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGCCCAATTTAT 172547 ||||| || || | || || ||||| | | |||||| ||||| || ||| ||||| Sbjct 1497952 GAATTCTTGGACAAGTTGGGATTGACTGACCGTAGAGAAGGCGATTTGGGACCAGTTTAT 1498011 Query 172548 GGATTTCAATGGAGACATGCAGGGGCTCAATATATCGACTGTGATACAGATTACACAGGA 172607 || || |||||||| ||| || || |||||| || ||||| |||||||| || || Sbjct 1498012 GGCTTCCAATGGAGGCATTTCGGAGCAGAATATAAGGATTGTGACACAGATTATACCGGT 1498071 Query 172608 CAAGGAGTGGACCAATT 172624 ||||| | ||||| || Sbjct 1498072 AAAGGATTCGACCAGTT 1498088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632489520938800