Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq8 138 1e-27 seq2 109 5e-19 >seq8 Length=506948 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || | |||||||| ||||| || |||||||| || || | Sbjct 222426 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATCACCCTCGAAGTTGAGTCCTCT 222485 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | || |||||||||||| ||||| || || || || || Sbjct 222486 GACACTATTGACAACGTTAAGTCCAA-GATCCAAGACAAGGAAGGTATTCCACCAGACCA 222544 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||||||||| || || || |||| || |||| | || || || || Sbjct 222545 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAA 222604 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||||||||| || || |||||||| ||| ||||| | ||||| Sbjct 222605 CATCCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGAGG 222652 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || | || ||||| |||||||| || ||||| ||| | | Sbjct 221970 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTTGAATCTTCT 222029 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || || || || ||| Sbjct 222030 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222089 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||||||||| || || || |||| || |||| | | || || || ||| Sbjct 222090 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACCTTATCTGACTACAAC 222149 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| || || |||||||| || ||||| | || || Sbjct 222150 ATCCAAAAGGAATCCACTCTTCACTTGGTATTAAGATTGAGAGGTGG 222196 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || | |||||||| || ||||| | ||||| ||| | | Sbjct 221514 ATGCAAATCTTCGTTAAGACATTGACCGGTAAGACCATTACCTTGGAAGTTGAATCTTCT 221573 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| || ||||| || || || || ||| Sbjct 221574 GACACTATTGACAACGTCAAGTCCAAGATCCAAGATAAGGAAGGTATTCCACCAGACCAA 221633 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||| ||||| || || || || |||| || |||| | || || || ||| Sbjct 221634 CAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCCGACTACAAC 221693 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| || || |||||||| || ||||| | || || Sbjct 221694 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 221740 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || | || ||||| |||||||| || ||||| ||| | | Sbjct 221742 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTCGAATCTTCT 221801 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || || || || ||| Sbjct 221802 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 221861 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||| ||||| || || || || |||| || |||| | || || || ||| Sbjct 221862 CAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCCGACTACAAC 221921 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| || || |||||||| || ||||| | || || Sbjct 221922 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 221968 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || | || ||||| |||||||| || ||||| || || | Sbjct 222198 ATGCAAATTTTCGTCAAGACCTTGACTGGTAAGACTATTACTCTTGAAGTCGAGTCCTCT 222257 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | || |||||||||||| ||||| || || || || || Sbjct 222258 GACACTATTGACAACGTTAAGTCCAA-GATCCAAGACAAGGAAGGTATTCCACCAGACCA 222316 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||| || ||||| || || | || || |||| | | || || || || Sbjct 222317 ACAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGCAGAACCTTATCTGACTACAA 222376 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||||||||| || || |||||||| || ||||| | || || Sbjct 222377 CATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 222424 >seq2 Length=3116340 Score = 109 bits (120), Expect = 5e-19 Identities = 589/938 (63%), Gaps = 19/938 (2%) Strand=Plus/Plus Query 139080 AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGC 139139 ||| ||||| | ||| || || || ||||| || ||| ||| || || ||||| Sbjct 2774226 AATGGAGGCCAAGTTACAGACAGCAACTTCCTCTGGGGAAGAGTACTCTACGATTTCACA 2774285 Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGC 139199 |||||| ||| | ||||||| |||| || || | ||| ||| | || |||||| || Sbjct 2774286 ACACAAGTTAGAAGACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGC 2774345 Query 139200 ATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAA 139259 || ||||| | ||| | || || || || || || | ||| | |||| | | Sbjct 2774346 GTCCTTGTACAACATGAAAGGAGTACCGGTCTCAGTCTGGGCCTCCAAAATGGCGTACCA 2774405 Query 139260 CAAGTC-----CCTAGCTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCG 139314 ||| | ||| | || ||| | | || | || | |||||| |||| Sbjct 2774406 CAACTTTTGGGCCTTGACAGTGTTTCTTCCTC-TAC----CTTCTCTCTCGTAACGTTCG 2774460 Query 139315 TAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACAC 139374 || | || |||||| |||||||| | || | | | || | || ||| | Sbjct 2774461 TACAACTCTTCGAATTCGTCACCGTATACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAG 2774520 Query 139375 ATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAA 139434 | || | ||| | ||||| | ||| | | ||||||||| || |||||||||||| Sbjct 2774521 AAAAGAGTCCAATCACCGTTTTGTTCGACTCTCTTCATGAACAAGTCTGGAATCCACAAA 2774580 Query 139435 GCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGG 139494 || | |||||| | || | | |||||| ||| ||| | | || | || | Sbjct 2774581 GCTGGGAACAAATCTCTAGCTCTAATCTCTTCCTTACCGTGGTTCTTTCTGATATCAATG 2774640 Query 139495 AAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG 139554 || || |||| ||| |||||||||||||||| || | ||| | || ||| || ||| Sbjct 2774641 AAGTCGAAAATGTCTGCGTGCCATGGTTCCAAGTATAAGGCAAAAGCACCTGGACGCTTG 2774700 Query 139555 ---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGA 139611 |||||||| || |||| || ||| ||||||||| || || | ||| || | | Sbjct 2774701 TTACCACCTTGGTCAACGTATCTAGCAGTATTATTGAAGACACGAACCATTGGAATGATA 2774760 Query 139612 CCGCTCGCTGTTCCGTTGGTGCTACGGAT---GGGACTGTTGCGAGCTCGGACGTCATGT 139668 ||| | | ||| ||||| || | | || || || | || || | || || Sbjct 2774761 CCGTTGGATGTACCGTTAGTACCAGCAATGTAGGCACCAGT---AGAACGAATGTTGTGG 2774817 Query 139669 ACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCG 139728 | | | || || || || || ||||| || || | || ||| || ||| Sbjct 2774818 ATGTGTAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTTAAAGTGTCG 2774877 Query 139729 TATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGT 139788 || || || || |||||||| ||| | ||| || || || || || | ||| || Sbjct 2774878 TAAATTCCGTCAATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGA 2774937 Query 139789 AGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATC 139848 | || || || |||| ||| ||| |||| ||||| | ||| |||||| Sbjct 2774938 GATGGGGTACCAGCGTTGAACAAAGTTGGAGAACCGTGAGTGAAGAAACGTTGGGACATC 2774997 Query 139849 AATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGC 139908 || | ||| | ||| ||| | || | ||||| ||||||||||| | ||| |||| | Sbjct 2774998 AAGTTGTAAGATTCAATGACCTTCTCGATATCATCACCGTGGATACCAATAGAAACTCTC 2775057 Query 139909 ATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTC 139968 || | || |||||| | ||| || ||| || | || | || || || Sbjct 2775058 ATAATCAAATGTTGTGGTCTTTCAGCAACCTTACCGTTGACACGTAAAAGGTATGATCTC 2775117 Query 139969 TCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 |||| ||||||| | |||||||| |||| ||||| || Sbjct 2775118 TCTAAGGTCTTGAAACCAAAGTAGTTATAATTGAAGTC 2775155 Score = 87.8 bits (96), Expect = 2e-12 Identities = 216/326 (66%), Gaps = 4/326 (1%) Strand=Plus/Plus Query 138435 AATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAG 138494 ||||||| || ||||| ||||||| | | | ||| | || ||| || | || Sbjct 2773584 AATGATGTTGTTCTTCATGGCATCGTTCCAGATACCCAAGTCGACCAAATCACGCAACAA 2773643 Query 138495 ATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGT 138554 ||| ||| | | |||||||||||| ||||| |||| | | ||| ||||| || Sbjct 2773644 GTATGGGTTGACAATCTGAAATTCACCAGCCAACACTCTTCTAGAGTAGATGTTAGATGT 2773703 Query 138555 GAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTA 138614 | | || ||||| |||||||||| |||| || || | || | || || ||||| Sbjct 2773704 GTATGGTTCAAAACATTCGTTGTTACCCAAGATTTGGGAAGTTGAGGCAGTTGGCATTGG 2773763 Query 138615 CGCCACCAAAAGAGAATTCCGTAAACCGTG--AAGCTTGATTCGTTCCTTGAGCGACGAC 138672 || ||||| | |||||| | |||||||| ||| ||| | ||| | || | Sbjct 2773764 GGCGACCAACAAAGAATTTCTCAAACCGTGCTTAGCCAACTTC--TGCTTCAAGGAATCC 2773821 Query 138673 CAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTT 138732 |||||||| || || | || ||| ||| ||||| || || ||||||| ||| Sbjct 2773822 CAGTCCCATAACTCAGTTGGCTTTCTGTCCCACAAGTCATATTGTAACAATCCTTGGGAA 2773881 Query 138733 GCGGGACTGCCTTCGTACGAATCGTA 138758 || ||| ||| ||||| || ||||| Sbjct 2773882 GCTGGAGAGCCCTCGTAAGACTCGTA 2773907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897543762800