Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03-
24] 10 sequences; 17,147,083 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 2e-18
seq1 87.8 2e-12
>seq3
Length=2759450
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 168555 ACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTTTGGAACGATAATGGTTCTCGT 168614
|| ||| | ||| ||| | ||| | |||||| ||| | ||| | | || || ||||||
Sbjct 1497892 ACAGATGCCAAATTATTGAGTGAAAAAGGTGTAAAAATCTGGGAAGGAAACGGATCTCGT 1497951
Query 168615 GAATTTTTAGATTTATGTGGTTTTACCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTAT 168674
||||| || || | || || || || | | |||||| ||||| || ||| |||||
Sbjct 1497952 GAATTCTTGGACAAGTTGGGATTGACTGACCGTAGAGAAGGCGATTTGGGACCAGTTTAT 1498011
Query 168675 GGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTGATACAGATTACACCGGA 168734
|| || |||||||| ||| ||||| |||||| || ||||| |||||||| |||||
Sbjct 1498012 GGCTTCCAATGGAGGCATTTCGGAGCAGAATATAAGGATTGTGACACAGATTATACCGGT 1498071
Query 168735 CAAGGAGTAGACCAATT 168751
||||| | ||||| ||
Sbjct 1498072 AAAGGATTCGACCAGTT 1498088
>seq1
Length=3488706
Score = 87.8 bits (96), Expect = 2e-12
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 193917 GGAGGTTTAAGATTTGGAGAAATGGAGAAAGACTGTATTTTAGTTCATGGTGCTACTCAA 193976
|| ||||| ||||| ||||||||||||| ||| ||| | | | | ||||||| | |||
Sbjct 3162309 GGTGGTTTGAGATTGGGAGAAATGGAGAGAGATTGTGTGATCGCTTATGGTGCCTCACAA 3162368
Query 193977 TTCTTGAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCACAGAA 194036
|| ||| |||||| || | | | |||||| ||||| |||||||||| |||| |
Sbjct 3162369 TTATTGTTAGAAAGATTGATGATTTCATCTGATGCTTTTGAAGTCGATGTATGCAACAAG 3162428
Query 194037 TGTGGTATGAT 194047
|||||| ||||
Sbjct 3162429 TGTGGTTTGAT 3162439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635177520602800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |