Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 seq1 87.8 2e-12 >seq3 Length=2759450 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 168555 ACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTTTGGAACGATAATGGTTCTCGT 168614 || ||| | ||| ||| | ||| | |||||| ||| | ||| | | || || |||||| Sbjct 1497892 ACAGATGCCAAATTATTGAGTGAAAAAGGTGTAAAAATCTGGGAAGGAAACGGATCTCGT 1497951 Query 168615 GAATTTTTAGATTTATGTGGTTTTACCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTAT 168674 ||||| || || | || || || || | | |||||| ||||| || ||| ||||| Sbjct 1497952 GAATTCTTGGACAAGTTGGGATTGACTGACCGTAGAGAAGGCGATTTGGGACCAGTTTAT 1498011 Query 168675 GGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTGATACAGATTACACCGGA 168734 || || |||||||| ||| ||||| |||||| || ||||| |||||||| ||||| Sbjct 1498012 GGCTTCCAATGGAGGCATTTCGGAGCAGAATATAAGGATTGTGACACAGATTATACCGGT 1498071 Query 168735 CAAGGAGTAGACCAATT 168751 ||||| | ||||| || Sbjct 1498072 AAAGGATTCGACCAGTT 1498088 >seq1 Length=3488706 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 193917 GGAGGTTTAAGATTTGGAGAAATGGAGAAAGACTGTATTTTAGTTCATGGTGCTACTCAA 193976 || ||||| ||||| ||||||||||||| ||| ||| | | | | ||||||| | ||| Sbjct 3162309 GGTGGTTTGAGATTGGGAGAAATGGAGAGAGATTGTGTGATCGCTTATGGTGCCTCACAA 3162368 Query 193977 TTCTTGAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCACAGAA 194036 || ||| |||||| || | | | |||||| ||||| |||||||||| |||| | Sbjct 3162369 TTATTGTTAGAAAGATTGATGATTTCATCTGATGCTTTTGAAGTCGATGTATGCAACAAG 3162428 Query 194037 TGTGGTATGAT 194047 |||||| |||| Sbjct 3162429 TGTGGTTTGAT 3162439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635177520602800