Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2 111 4e-19 seq6 89.7 1e-12 >seq2 Length=3116340 Score = 111 bits (122), Expect = 4e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 173106 GGCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTG 173165 |||||||||||| | ||||| || |||| ||| | || ||| |||||||| || Sbjct 2774343 GGCGTCCTTGTACAACATGAAAGGAGTACCGGTCTCAGTCTGGGCCTCCAAAATGGCGTA 2774402 Query 173166 CCAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATA 173225 ||| | | |||||| || || || |||| |||| |||||| | ||||| | || || Sbjct 2774403 CCACAACTTTTGGGCCTTGACAGTGTTTCTTCCTCTACCTTCTCTCTCGTAACGTTCGTA 2774462 Query 173226 GAGGTCTTCGAAATCCTTCCCGTAAATTTC-GTCAAGACCGGGAGCTTCCTTCGGACAAA 173284 | |||||||| || | ||||| | ||| | |||| || |||||||| || ||| | | Sbjct 2774463 CAACTCTTCGAATTCGTCACCGTATACTTCTGGCAAG-CCTGGAGCTTCGTTTGGAGAGA 2774521 Query 173285 AGAGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCA 173339 | ||| |||||| || | ||||| ||||||||||| | ||| | | |||| Sbjct 2774522 AAAGAGTCCAATCACCGTTTTGTTCGACTCTCTTCATGAACAAGTCTGGAATCCA 2774576 >seq6 Length=1682205 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || || || |||||||| || || ||||| | || || ||| Sbjct 47140 ACTGGTAAGACCATTACCTTGGAAGTCGAGTCCTCCGACACCATTGACAATGTCAAGTCC 47199 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || ||||| ||| || ||| |||||| | |||||||| || ||| Sbjct 47200 AAGATTCAGGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTCGCTGGTAAG 47259 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||||||||||| || || ||| | | || |||||| ||||||| || || || | ||| Sbjct 47260 CAGTTGGAAGACGGTAGAACTCTTTCTGACTACAACATCCAGAAGGAATCCACCTTGCAC 47319 Query 206374 CTTGTTTTGAGA 206385 | || || ||| Sbjct 47320 TTGGTCTTAAGA 47331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820648579210