Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2 102 1e-15 >seq2 Length=3116340 Score = 102 bits (112), Expect = 1e-15 Identities = 384/588 (65%), Gaps = 31/588 (5%) Strand=Plus/Minus Query 1455743 CGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGA 1455802 || || || || ||||| ||| ||||| | ||| |||||||| || ||||| || Sbjct 2727029 CGTTTCGTTCTCTTCCCAATCAAGTACCATGAAGTCTGGCAAATGTAC-AAGAAGGCTGA 2726971 Query 1455803 GGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTC 1455862 |||||||| ||||||||||| || ||||| | | || || ||||| || Sbjct 2726970 AGCCTCCTTCTGGACCGCCGAAGAAATCGACTTGAGTAAGGATAC----CACTGACTGGA 2726915 Query 1455863 GC-------TGAGCGACGACGAGCGCCATTTCATCAAGCACGTC-CTCGCCTTTTTTCGC 1455914 | ||| | | |||| | | ||||| | ||| || | |||| ||||| Sbjct 2726914 ACCACAAGTTGAACAAGAACGAAAGATACTTCATTT--CCCGTATCTTGGCTTTCTTCGC 2726857 Query 1455915 CGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTT-TATGAAAGAGGTCCAAT 1455973 |||| ||||| || || ||||||| ||| | ||| | || || |||||| Sbjct 2726856 CGCCTCTGATGGTATTGTCAACGAGAACTTGGTTGAGAACTTCTCTGCT-GAAGTCCAAA 2726798 Query 1455974 TGCCAGAGGCACGTTTGTTT-TACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAA 1456032 | ||||| || | ||||| ||||| ||||| || || |||||||| |||||||| Sbjct 2726797 TCCCAGAAGC-CAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATTCACTCTGAG 2726739 Query 1456033 ACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAG--GACCACCTCT 1456090 || ||||| | | || ||||| ||||| |||||||| | |||| ||| ||| | Sbjct 2726738 ACATACTCTTTATTAATTGACACTTACGTTAAGGACCC--TAAGGAAGCCGACTTCCTTT 2726681 Query 1456091 TTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGA 1456150 | ||||||||||| | || | | || || ||||| |||||||| ||| |||| Sbjct 2726680 TCAACGCCATCGACAACATTCCATGTATCAGAAAGAAGGCTGACTGGGCCTTGAGATGGA 2726621 Query 1456151 TCAACAAGGAGG--GCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAG 1456207 || | || | |||| | || | ||| | | || | || || || || ||| Sbjct 2726620 TCTCTGACGATGAAGCCTTG----TTCGGTGAGAGATTAGTAGCTTTCGCTGCTGTTGAG 2726565 Query 1456208 GGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATG 1456267 || ||||||||| || ||| | ||||| ||| | |||||| | || | ||| Sbjct 2726564 GGTATCTTTTTCAGTGGATCCTTCGCTTCTATCTTCTGGTTGAAGAAGAGAGGTTTAATG 2726505 Query 1456268 CCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAGTTTT 1456315 || ||| || || ||||||||| ||| || | ||||||| ||| Sbjct 2726504 CCAGGT-TTGACTTTCTCCAACGAATTGATCTGTAGAGACGAAGGTTT 2726458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810235481620