Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2 181 1e-40 seq1 116 5e-21 >seq2 Length=3116340 Score = 181 bits (200), Expect = 1e-40 Identities = 1179/1879 (63%), Gaps = 47/1879 (3%) Strand=Plus/Plus Query 68364 CTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACC 68423 |||||| | || ||||| |||| | | || | || ||| | || || |||||||| Sbjct 2773302 CTTATCAACAGTGAACTGGATGGCAGCAGCAGCAGCTTGTGTTCTTAAGTAATACATACC 2773361 Query 68424 GGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGG 68483 || |||| ||| |||| ||||||||||||||| || || || |||| Sbjct 2773362 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTACCCATTGTTGG 2773421 Query 68484 ATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGC 68543 || || || || |||| || || || || ||||| || |||| || || || Sbjct 2773422 GTCCTTGATGTGGATGTTCAAAGACTGTGACTGGTCAATGAAGGCAGCTCTGTCAGCAGC 2773481 Query 68544 CATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATC 68603 ||| | |||||| |||||| | |||||||||| ||||||| | | || | || Sbjct 2773482 CATGTCAATAATATGCTTTTGTGAGATTTCCCAAACAGTCTTATATAAGGCCTTAAGCTC 2773541 Query 68604 ATCTGGAAGGCTCGTATTTTGAATGGATCCA-CCATCG---GATATAATTATATTCTTGA 68659 |||||||| | | | || ||||| | |||| | || || || | ||||| | Sbjct 2773542 ATCTGGAACATTAGGCAAT-GACTGGATAGAACCATTGTTAGAAATGATGTTGTTCTTCA 2773600 Query 68660 TCTCATCATTCCACAATTTTCTC---TCCGTTAAAACTCTAAGGAGATGCGGATTAACTA 68716 | |||| ||||| | | | | || ||| | | | | | || || || | Sbjct 2773601 TGGCATCGTTCCAGA---TACCCAAGTCGACCAAATCACGCAACAAGTATGGGTTGACAA 2773657 Query 68717 TTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAG 68776 | |||||||| |||| |||||||| | || ||| || ||| || |||||||| | | Sbjct 2773658 TCTGAAATTCACCAGCCAACACTCTTCTAGAGTAGATGTTAGATGTGTATGGTTCAAAAC 2773717 Query 68777 ATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAAC 68836 |||| || || |||| ||||| | |||||| ||||||||||| || || ||||| ||| Sbjct 2773718 ATTCGTTGTTACCCAAGATTTGGGAAGTTGAGGCAGTTGGCATTGGGGCGACCAACAAAG 2773777 Query 68837 TATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAG 68896 |||||| | ||| || | | || | || | | ||| ||||| | |||| Sbjct 2773778 AATTTCTCAAACCGTGCTTAGCCAACTTCTGCTTCAAGGAATCCCAGTCCCATAACTCAG 2773837 Query 68897 ATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTAT 68956 ||| | ||| | || ||||||| | ||| | || || || | | Sbjct 2773838 TTGGCTTTCTGTCCCACAAGTCATATTGTAACAATCCTTGGGAAGCTGGAGAGCCCTCGT 2773897 Query 68957 ATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAAT 69016 | | || ||||| ||||| | |||| | ||| | || || | ||||||| || Sbjct 2773898 AAGACTCGTAAGGGCCTTCTTCGGCAGCCAATTCGATAGAGGCTTCAACGGCACCGTGAT 2773957 Query 69017 AAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAAT 69076 | || ||||| || || | | || | ||| || ||| | |||||||| |||| Sbjct 2773958 AGATAGTTTCAAAGATTTGGATGTTCAATTCTCTAGCCTCTTGGGAGTCGAATGG-TAAT 2774016 Query 69077 GTAAAAGA-ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTC 69135 | || | || || | ||| ||||| || || || || | | | || ||||| | |||| Sbjct 2774017 CTCAATGCCATGAAGGTATCAGCCAAACCTTGGACACCCAAAGCAATTGGTCTGTTTCTC 2774076 Query 69136 TTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGA 69195 || || || || |||||||| |||| || || || || | || || || || || | Sbjct 2774077 TTGTTAGATCTCTCAGCTTCCGGAACTGGGTAGTAGTTTCTGTCAATGATCTTGTTCAAG 2774136 Query 69196 TTTCG---GACT-ACT-----ACTTTAACCACGTCCTTTAGTTTG----AGAAAATCAAA 69242 || || ||| ||| |||| || | || | ||| | ||| | Sbjct 2774137 TTACGAGTGACGGACTTGGTGACTTCGTGCAACTTCTCAAAGTTGTACCACAAAGACTTG 2774196 Query 69243 TCGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTC 69302 |||| ||| | |||| | | || | || || | ||||| || || || || Sbjct 2774197 CTGTCCTTCTC-AGCAAAGGAAGGTAAAGCAATGGAGGCCAAGTTACAGACAGCAACTTC 2774255 Query 69303 ATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAG 69362 | | | || | || || || ||| | ||| | | ||||| | |||| Sbjct 2774256 CTCTGGGGAAGAGTACTCTACGATTTCACAACACAAGTTAGAAGACTTGATTATACCCAA 2774315 Query 69363 ATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGT 69422 || | || || |||| |||||||||||||||||||| | || || |||||||| || Sbjct 2774316 GTTCTTTTGGTTGGTCTTCTTGTTACAGGCGTCCTTGTACAACATGAAAGGAGTACCGGT 2774375 Query 69423 TTCAATCTGAGATTCGATAATAGATTTCCA-AAC-----GACCCTAGCA---TTTATTAC 69473 ||| |||| | || | ||| | | ||| ||| | || | || ||| || | Sbjct 2774376 CTCAGTCTGGGCCTCCAAAATGGCGTACCACAACTTTTGGGCCTTGACAGTGTTTCTTCC 2774435 Query 69474 GGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCA 69533 ||| || ||||||| | | || || || | | ||||||||| || || | Sbjct 2774436 --TCT----AC-CTTCTCTCT--CGTAACGTTCGTACAACTCTTCGAATTCGTCACCGTA 2774486 Query 69534 AACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTT 69593 || || ||| || ||| ||| |||||| | | | | ||| || | | | | Sbjct 2774487 TACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCAATCACCGTTTTGTTC 2774546 Query 69594 AACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATT 69653 |||| ||||| || | || |||||||| | |||| || | |||||| | |||| | Sbjct 2774547 GACTCTCTTCATGAACAAGTCTGGAATCCACAAAGCTGGGAACAAATCTCTAGCTCTAAT 2774606 Query 69654 TTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 69713 ||||| || || || ||| | | ||| | || || | ||| || | |||||||| Sbjct 2774607 CTCTTCCTTACCGTGGTTCTTTCTGATATCAATGAAGTCGAAAATGTCTGCGTGCCATGG 2774666 Query 69714 TTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGC 69773 ||| | |||| || | | || || || || || || || || || | |||||| || Sbjct 2774667 TTCCAAGTATAAGGCAAAAGCACCTGGACGCTTGTTACCACCTTGGTCAACGTATCTAGC 2774726 Query 69774 AGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGA 69833 ||| ||||| |||| | | ||| ||||| ||||| || ||| |||| || || |||| Sbjct 2774727 AGTATTATTGAAGACACGAACCATTGGAATGATACCGTTGGATGTACCGTTAGTACCAGC 2774786 Query 69834 AATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTT 69893 ||| || || | | ||||| || || || ||| || || || || | || Sbjct 2774787 AATGTAGGCACCAGTAGAACGAATGTTGTGGATGTGTAAACCAATACCACCAGCACTCTT 2774846 Query 69894 AGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953 || || | ||||| || || ||||| || || || || || || || |||| Sbjct 2774847 GGAAATCAAGGCACAGGTCTTTAAAGTGTCGTAAATTCCGTCAATAGAGTCGTCCTTCAT 2774906 Query 69954 GTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGG 70013 | | ||| ||||| ||||||||| || | || || || || || || || || Sbjct 2774907 GGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTACCAGCGTTGAACAAAGTTGG 2774966 Query 70014 AGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTAT 70073 ||| |||||||||| | || || | || ||||| | |||||| | || || Sbjct 2774967 AGAACCGTGAGTGAAGAAACGTTGGGACATCAAGTTGTAAGATTCAATGACCTTCTCGAT 2775026 Query 70074 ATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCG 70132 ||| ||| | || || || || | || | ||| | || ||| || |||| ||| | Sbjct 2775027 ATCATCACCG-TGGATACCAATAGAAACTCTCATAATCAAATGTTGTGGTCTTTCAGCAA 2775085 Query 70133 TTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGT 70192 ||| || | || ||||||||| | || | || || || ||||| ||||| | Sbjct 2775086 CCTTACCGTTGACACGTAAAAGGTATGATCTCTCTAAGGTCTTGAAACCAAAGTAGTTAT 2775145 Query 70193 ATGAAAAGTCTCTTTCGTA 70211 | ||||| | ||||| Sbjct 2775146 AATTGAAGTCACGATCGTA 2775164 Score = 178 bits (196), Expect = 2e-39 Identities = 578/888 (65%), Gaps = 26/888 (3%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| |||| || | |||||||| || ||||| || || | || || || || Sbjct 2726149 TTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCTAAGGAGATGTTC 2726208 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| || || || || || | || || || || || || | |||| Sbjct 2726209 TCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTGCCCAAAGC---AATC 2726265 Query 39446 AAT---CTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502 ||| || || ||||| || || | |||| ||||| ||| |||||||||| Sbjct 2726266 AATAATCTGTCGGCAACGAACTCGACGTATTGACACATCAATTCGGCGTTCATTCCTAAT 2726325 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562 | |||||| | ||| || || | || |||| ||||| | || || || || || Sbjct 2726326 AAGGAAACTGGCAAAGCATCAGTGAAGAATTCTTGCTCGATCTTGACAGCTTCAGTAATG 2726385 Query 39563 ATCGATGTTACTACCTCATCACTCGGT---GGATGCAAT--AAATGTTTAAACATTAAGC 39617 ||| | | || || ||| ||| | || | || || |||| || | Sbjct 2726386 ATCT---TCTCAACA--ATAACTGGGTCTGGTCTGTTTTGCAAGTGAGAGAACAACAAAC 2726440 Query 39618 AGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTC 39677 |||||||||| |||| || || ||||||| || |||||||| || || || | | Sbjct 2726441 AGGCGAAGTCGGTGTGTAAACCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAAC 2726500 Query 39678 CAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGA 39737 | ||||||| ||| | ||| || | ||| || || | ||| || |||||| || |||| Sbjct 2726501 CTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAAAGA 2726560 Query 39738 TGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAAC----TTGTATCATTATGT 39793 | || || || || || || || || | |||||| ||| ||| | ||| | | Sbjct 2726561 TACCCTCAACAGCAGCGAAAGCTACTAATCTCTCACCG-AACAAGGCTTCATCGTCAGAG 2726619 Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853 ||||| || ||||| ||||| ||||| | | ||| || || | || || || || Sbjct 2726620 ATCCATCTCAAGGCCCAGTCAGCCTTCTTTCTGATACATGGAATGTTGTCGATGGCGTTG 2726679 Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913 || || | | ||| | | || ||||| || || || ||||| | | || | Sbjct 2726680 AAAAGGAAGTCGGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAATAAAGAGTATGTC 2726739 Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 || || || |||||||| ||| || || || ||||| ||||| | ||||| | ||| Sbjct 2726740 TCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATT 2726799 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || || || | | | || | || |||| || || || || || |||||| ||||| Sbjct 2726800 TGGACTTCAGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGGCGGCG 2726859 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTC-ATCGGGTGTCAATTT---ATTCCA 40089 || || ||||| | | | ||| || ||| |||| || || |||| || ||||| Sbjct 2726860 AAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGT-TCAACTTGTGGTTCCA 2726918 Query 40090 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTT 40149 |||| || |||| || | || | |||||| || ||||| || || || || ||||| Sbjct 2726919 GTCAGTGGTATCCTTACTCAAGTCGATTTCTTCGGCGGTCCAGAAGGAGGCTTCAGCCTT 2726978 Query 40150 TTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 |||||||| | ||| | ||| | || | ||||| || | ||| || Sbjct 2726979 CTTGTACATTTGCCAGACTTCATGGTACTTGATTGGGAAGAGAACGAA 2727026 >seq1 Length=3488706 Score = 116 bits (128), Expect = 5e-21 Identities = 336/515 (65%), Gaps = 3/515 (1%) Strand=Plus/Minus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 |||||||| |||| | ||||| | || ||| || | |||||||| || ||||||| Sbjct 3156338 GTAAACTGGATGGCTCTTGATGCAGCTTGTGTTCGCAAGTAGTACATTCCAGTTTTCAAT 3156279 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 || |||| |||| ||||| ||| || || || | | |||| | || Sbjct 3156278 CCCTTGTTCCAAGCGTAAAAATGACAACTCGTAAGCTTTCCAAACGTTGGGTTTTGTAAG 3156219 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 ||||||||||| || || || || || ||||||||| |||||||| | | | Sbjct 3156218 TGAATATTCATACTCTGCAGCTGGTCAATAAACTTTCCTCTATCGGCCGCCATGTCGACA 3156159 Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCT-GGAAG 68612 || |||||| | ||| ||||| | ||| ||| | | | || || || | | ||| Sbjct 3156158 ATGACCTTTTGCGAAATCTCCCACACAGTTTTATACAAGTCCTTTATCTCCTGTGGGATA 3156099 Query 68613 GCTCGTAT--TTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670 | |||| | |||||||||||| || ||||| | ||| | ||| || || Sbjct 3156098 TTTGGTATGCTCTGAATGGATCCATTTTCAAGAATAATCTTGTTCCTCATCGCAGACGTC 3156039 Query 68671 CACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCA 68730 || || | || ||||| | | | || | | ||| ||||| || || || ||| Sbjct 3156038 CATAAACCTAAGTCGATTAAATCCTTCAATAGGTACTTATTTACTATCTGGAACTCTCCA 3155979 Query 68731 GATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCC 68790 || | |||||| | || || | ||| ||||| || || | |||||||| || Sbjct 3155978 GAAAGCACTCTTCTTGTATATAAATTGGAAGTATACGGCTCAAAGCATTCATTAAAGCCG 3155919 Query 68791 AGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCA 68850 ||||| || | ||| |||||||| ||||| |||||||| || || ||||| || ||| Sbjct 3155918 AGAATCTGTGAAGTCGATGCAGTAGGCATCGGTGCCACTAACAAGGAGTTTCTGAGGCCA 3155859 Query 68851 TGTGTTATGATTTTATCTTTTAGATGTTTCCAATC 68885 ||| | ||| || || |||| | | |||||| Sbjct 3155858 TGTACTTTGACTTGATTCTTTAATTCATCCCAATC 3155824 Score = 102 bits (112), Expect = 1e-16 Identities = 226/339 (67%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 69489 CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548 |||||| || |||| | ||||| | || || ||||| || ||| ||||||| Sbjct 3155190 CTCTTTCTCGTATTTCTTGTATAGTTCAACAAACTCTTCTCCGTAACAATCTGCCAATCC 3155131 Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 ||| ||| | ||| | | || ||||| | |||| | || || | | ||| || Sbjct 3155130 TGGAGCTTCGTCTGGGGAAAATAAGGACCAATCCTCATTGTTTTTGACCCTCTCCATGAA 3155071 Query 69609 TAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGT 69668 || ||| |||||||| ||| | | ||| | ||||| || || || || || || Sbjct 3155070 TAAATCCGGAATCCATAGACCAAAAAACAAATCTCGCGTCCTGAGCTCCTCTTTGCCGTG 3155011 Query 69669 AttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGC 69728 || || || | ||| | | || | | |||||||||||||| |||| |||||| || Sbjct 3155010 GTTCTTCTTCAAATCCAAGATTTCAAAGACGTCAGAATGCCATGGCTCTAAATATATAGC 3154951 Query 69729 CATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGAC 69788 | |||| |||| ||| || ||||| ||||| | ||||| || |||| |||| | || Sbjct 3154950 AAAAGCTCCTGGTCTTTTGTTCCCTCCTTGATCCACATATCTAGCTGTGTCATTAAATAC 3154891 Query 69789 TCTCAGCATCGGAATAATACCATTAGATTTACCATTTGT 69827 | | ||||| || | | ||| | | | ||||||| || Sbjct 3154890 TTTAAGCATAGGCACCAACCCACTGGCTGTACCATTGGT 3154852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908714136400