Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq5 145 6e-30 >seq5 Length=1751141 Score = 145 bits (160), Expect = 6e-30 Identities = 242/350 (69%), Gaps = 21/350 (6%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 || |||||||| |||||||| ||||| || | ||||||||| ||| || |||||||| Sbjct 1479836 CCAAAAATTGTCAATGGTCCAGAAATGTTGAGTAAATATGTCGGTGCGTCTGAAGAAAAC 1479777 Query 19489 GTACGACGTTTGTT------TGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA 19542 | || || || |||||| |||||| | ||||||| || ||| | | Sbjct 1479776 ATTCGTAACTTATTCAAGGATGCTGAAGCTGAATACAAACAAAAGGGTG-AGGATTCCGA 1479718 Query 19543 AGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCT 19602 |||||| | || || | |||||||||||| | | | ||| || ||||| ||| Sbjct 1479717 -----TTTGCATGTCATCATTTTCGATGAATTGGACTCTGTATTTAAACAGAGAGGCTCT 1479663 Query 19603 GG---------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTA 19653 || || | ||| ||| ||||| ||||| || || | |||| || | Sbjct 1479662 GGTAAATCTGATGGTACTGGTGTAGGTGACAACGTTGTTAACCAGTTATTGTCCAAGATG 1479603 Query 19654 GACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTA 19713 ||||||||| ||||| |||| |||||||| |||||||| |||||||| ||| |||| || Sbjct 1479602 GACGGTGTTGACCAATTGAACAATATTTTGGTTATTGGTATGACTAACAGATTGGATTTG 1479543 Query 19714 ATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAAT 19763 || || | ||||| ||| |||| ||| | || || || | |||||||| Sbjct 1479542 ATTGATACAGCCTTGTTAAGACCTGGTAGATTCGAGATCCAAATCGAAAT 1479493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455951560050