Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 288 1e-72 seq5 96.9 4e-15 seq3 82.4 1e-10 >seq2 Length=3116340 Score = 288 bits (318), Expect = 1e-72 Identities = 987/1514 (65%), Gaps = 55/1514 (4%) Strand=Plus/Plus Query 110668 GTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG 110727 ||||||||| ||| ||||| || | |||||| ||||||||| | ||||||||| Sbjct 2773650 GTTGACAATCTGAAATTCACCAGCCAACACTCTTCTAGAGTAGATGTTAGATGTGTATGG 2773709 Query 110728 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787 |||||| ||||| || |||||||||||||| | || ||||| ||||||||||| || | Sbjct 2773710 TTCAAAACATTCGTTGTTACCCAAGATTTGGGAAGTTGAGGCAGTTGGCATTGGGGCGAC 2773769 Query 110788 CAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC--CTTGAGAACATCCCAGT-- 110843 ||| | | || | | ||| | || | | ||| ||| | |||||||| Sbjct 2773770 CAACAAAGAATTTCTCAAACCGTGCT--TAGCCAACTTCTGCTTCAAGGAATCCCAGTCC 2773827 Query 110844 CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGG 110903 | || | || |||| || | ||||||| |||| | || | || |||||||| || | Sbjct 2773828 CATAACTCAG-TTGGCTT-TCTGTCCCACAAGTCATATTGTAACAATCCTTGGGAAGCTG 2773885 Query 110904 GAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGCCTCC 110962 |||| ||||| | | || || | |||| | |||||||||| | || || || Sbjct 2773886 GAGAGCCCTCGTAAGACTCGTAAGGGCCTTCTTCGGCAGCCAATTCGATAG-AGGCTTCA 2773944 Query 110963 AGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAA 111022 | || ||||||| || ||||||||||| | |||| || | || || | || Sbjct 2773945 ACGGCACCGTGATAGATAGTTTCAAAGATTTGGATGTTCAATTCTCTAGCCTCTTGGGAG 2774004 Query 111023 TCAAATGCGTAGCGGCACAA---AATAAATACATCCGCGAGACCTTGAACACCCAAACCA 111079 || |||| ||| | ||| || || ||| || | |||||| ||||||||| || Sbjct 2774005 TCGAATG-GTA--ATCTCAATGCCATGAAGGTATCAGCCAAACCTTGGACACCCAAAGCA 2774061 Query 111080 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTG 111136 || ||||||| || | | ||||| || | ||| || ||| || || | |||||| Sbjct 2774062 ATTGGTCTGTTTCTCTTGTTAGA---TCTCTCAGCTTCCGGAACTGGGTAGTAGTTTCTG 2774118 Query 111137 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA- 111195 ||||||| ||| | || || || ||| |||| ||| || | || ||| | Sbjct 2774119 TCAATGATCTTGTTCAAGTTACGAGTGACGGACTTGGTGACTTCGTGCAACTTCTCAAAG 2774178 Query 111196 ----ATCA-AAAG---TGCGAGTCTCTTCATTGACATACTTTGGAAGG----GCGATTGA 111243 | || |||| ||| ||| |||| | || | |||||| || || || Sbjct 2774179 TTGTACCACAAAGACTTGC-TGTC-CTTC-TCAGCAAA----GGAAGGTAAAGCAATGGA 2774231 Query 111244 TGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAA 111303 ||||| || || ||||| || || | |||||||| ||||| ||| || Sbjct 2774232 GGCCAAGTTACAGACAGCAACTTCCTCTGGGGAAGAGTACTCTACGATTTCACAACACAA 2774291 Query 111304 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTT 111363 ||| ||| ||| || | ||||| ||||||||||| |||||||||| || || ||||| Sbjct 2774292 GTTAGAAGACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCGTCCTT 2774351 Query 111364 GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACAT 111422 ||| | |||| | || || || ||||| ||||| | | | ||| || | ||| ||| | Sbjct 2774352 GTACAACATGAAAGGAGTACCGGTCTCAGTCTGGGCCTCCAAAATGGCGTACCACAACTT 2774411 Query 111423 CGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTT 111482 | | || | ||| || | | | || || |||||| | ||| | ||| Sbjct 2774412 TTGGGCCTTG-ACAGTGTTTCTTCCTCTACCTTCTCTCTCGTAACGTTCGTACAACTCTT 2774470 Query 111483 CAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACC 111542 | || || ||||| | || | | ||||| || | || |||| ||||||||| || Sbjct 2774471 CGAATTCGTCACCGTATACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCC 2774530 Query 111543 ATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 111602 | | ||| || || || | ||||||||| | |||||||||||||| | || || | Sbjct 2774531 AATCACCGTTTTGTTCGACTCTCTTCATGAACAAGTCTGGAATCCACAAAGCTGGGAACA 2774590 Query 111603 GATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGA 111662 ||||||| | | |||||| | ||| ||||| || | |||| ||| || | | Sbjct 2774591 AATCTCTAGCTCTAATCTCTTCCTTACCGTGGTTCTTTCTGATATCAATGAAGTCGAAAA 2774650 Query 111663 TATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAG 111716 | || ||||||||||| || | || | || | || || | ||||| ||| Sbjct 2774651 TGTCTGCGTGCCATGGTTCCAAGTATAAGGCAAAAGCACC---TGGACGCTTGTTACCAC 2774707 Query 111717 CTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTG 111776 |||| | || || | || || || || || |||| ||||||||| ||||| | | Sbjct 2774708 CTTGGTCAACGTATCTAGCAGTATTATTGAAGACACGAACCATTGGAATGATACCGTTGG 2774767 Query 111777 ATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCC 111836 || ||| || || || ||| | | | | | | | |||||||| | | Sbjct 2774768 ATGTACCGTTAGTACCAGCAATGTAGGCACCAGTAGAACGAATGTTGTGGATGTGTAAAC 2774827 Query 111837 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 111896 ||||||| ||||| | ||| || || ||||| | | | ||| | || || |||| Sbjct 2774828 CAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTTAAAGTGTCGTAAATTCCGT 2774887 Query 111897 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 111956 || ||||| ||||| |||||| |||||| ||| ||||| || || ||| |||| Sbjct 2774888 CAATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTAC 2774947 Query 111957 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATG 112016 |||| ||||| | ||||| | ||||| |||| | || |||||||||| || ||| | Sbjct 2774948 CAGCGTTGAACAAAGTTGGAGAACCGTGAGTGAAGAAACGTTGGGACATCAAGTTGTAAG 2775007 Query 112017 TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGT 112076 || | ||| || || || || |||||||| || || | || | ||| | || | Sbjct 2775008 ATTCAATGACCTTCTCGATATCATCACCGTGGATACCAATAGAAACTCTCATAATCAAAT 2775067 Query 112077 ACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTT 112135 ||||| |||| | | || | || ||| ||| || | || |||| | ||| Sbjct 2775068 GTTGTGGTCTTTCAGCAACCTTACCGTTGACACGTAAAAGGTATGATC-TCTCTAAGGTC 2775126 Query 112136 TTGAGACCAAAGTA 112149 |||| ||||||||| Sbjct 2775127 TTGAAACCAAAGTA 2775140 >seq5 Length=1751141 Score = 96.9 bits (106), Expect = 4e-15 Identities = 270/412 (66%), Gaps = 8/412 (2%) Strand=Plus/Plus Query 11452 ATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGC 11511 ||| |||||||| || | | ||||| | ||| | ||||| |||||||| | || Sbjct 206939 ATCGAAACGACCAGGTCTTAAAAGGGCCTTATCCAAAATATCTGGACGATTAGTACCTGC 206998 Query 11512 AATAACCACAATGCCAGTCTC---ATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATT 11568 | ||| |||| || || | ||||| ||||||||||| | |||||| || Sbjct 206999 CAAAACAACAA---CATGGTCGGAAGAATCAAAACCATCCATCTCAACCAATAATTGGTT 207055 Query 11569 AATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGTTGCTTGCCCAC 11628 | ||| | |||||||||||||||| | || || || | || ||| || | Sbjct 207056 CAATGTGTTTTCTCTCTCATCATTTCCCCCAATCTTTCCGTTACCTCTTTCCTTACCAAT 207115 Query 11629 CGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAG 11688 |||||||| || |||| ||||| |||| | || | || | ||| ||| ||| | Sbjct 207116 TGCATCAATTTCGTCAACGAAGATAATAGAAGGAGCCATGTCTCTTGCGGTTTTAAATAA 207175 Query 11689 ATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCA 11748 ||| || || ||| ||||| ||||| |||||||| || || || | | | || Sbjct 207176 ATCACGGACTCTTGATGCACCTACACCGACAAACATTTCAACGAATTCGGAACCTGATAC 207235 Query 11749 CTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808 | | ||| || ||| || ||||| || | ||| ||| | |||||||| || || Sbjct 207236 CGATAAGAAAGGAACACCTGCCTCACCAGCTGTAGCTTTGGCTAAAAGGGTCTTACCGGT 207295 Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTC 11858 |||||| ||| | | || || || | |||||||| ||||| ||||| Sbjct 207296 ACCTGGAGGACCAGACAAAATAGCACCCCTTGGGATCTTAGCACCTAACTTC 207347 >seq3 Length=2759450 Score = 82.4 bits (90), Expect = 1e-10 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 164613 GTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGGGTGTTATT 164672 || || ||| |||| ||| | || | || || |||||| |||||| |||||| | Sbjct 260325 GTCGCCCCAAGATCTGGTTTGGCCGCAAAACACGGTATTTCCACTGGTGCTGGTGTTGTG 260384 Query 164673 GATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACAAAGACTTT 164732 ||| | ||||| | ||| || ||||| || |||| ||||| ||| |||||||||||| Sbjct 260385 GATGCTGACTACAGAGGAGAGGTCAAGGTTATTCTTTTCAACCACTCCGACAAAGACTTT 260444 Query 164733 GAGGTAAAGAAAGGGGATCGCATCGCACAA 164762 | || |||| |||||| | || || ||| Sbjct 260445 GCTGTCGAGAAGGGGGATAGAATTGCCCAA 260474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031921496000