Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 212 8e-50 >seq2 Length=3116340 Score = 212 bits (234), Expect = 8e-50 Identities = 954/1495 (64%), Gaps = 35/1495 (2%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| || | |||||||| ||||| || || ||||||||||||||||||| || ||| Sbjct 2773690 TAGATGTTAGATGTGTATGGTTCAAAACATTCGTTGTTACCCAAGATTTGGGAAGTTGAG 2773749 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGTT 118299 || || ||||| || || | | | || | | ||| | || || | | | | Sbjct 2773750 GCAGTTGGCATTGGGGCGACCAACAAAGAATTTCTCAAACCGTGCTTAGCCAACTTC--T 2773807 Query 118300 CCTTGAGAGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTG 118357 ||| | | |||||||| || | || ||| || | | ||||| ||| | || Sbjct 2773808 GCTTCAAGGAATCCCAGTCCCATAACTCAG--TTGGCTTTCTGTCCCACAAGTCATATTG 2773865 Query 118358 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 118417 | | |||||||| ||||| || ||||| | | ||| || ||||| || | | || Sbjct 2773866 TAACAATCCTTGGGAAGCTGGAGAGCCCTCGTAAGACTCGTAAGGGCCTTCTTCGGCAGC 2773925 Query 118418 CAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATT 118474 ||||||| ||| || || | ||| ||||||| || |||||||| || | || Sbjct 2773926 CAATTCGATAGAG---GCTTCAACGGCACCGTGATAGATAGTTTCAAAGATTTGGATGTT 2773982 Query 118475 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAG 118534 || | | | ||||| | ||| || || | | || | || || ||| || | Sbjct 2773983 CAATTCTCTAGCCTCTTGGGAGTCGAATGGTAATCTCAATGCCATGAAGGTATCAGCCAA 2774042 Query 118535 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCAC 118594 |||||||||||| | ||||||| | | |||| | ||||| || ||| | || Sbjct 2774043 ACCTTGGACACCCAAAGCAATTGGTCTGTTTCTCTTGTTAGATCTCTCAGCTTCCGGAAC 2774102 Query 118595 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 118654 || || | || || || || | | | || | || ||||| ||| |||| ||| Sbjct 2774103 TGGGTAGTAGTTTCTGTCAATGATCTTGTTCAAGTTACGAGTGACGGACTTGGTGACTTC 2774162 Query 118655 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCT--CT-TCATTGACATACTTAGGAAGG-- 118709 || | ||| || | | | | || || || || || || | ||||||| Sbjct 2774163 GTGCAACTTCTCAAAGTTGTACCACAAAGACTTGCTGTCCTTCTCAG-CAAAGGAAGGTA 2774221 Query 118710 --GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 118767 || || || |||| ||||| |||| || || || |||||||| |||| Sbjct 2774222 AAGCAATGGAGGCCAAGTTACAGACAGCAACTTCCTCTGGGGAAGAGTACTCTACGATTT 2774281 Query 118768 CCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 118827 | |||||||| ||| ||| || | |||||||||||||| || | ||| |||||| Sbjct 2774282 CACAACACAAGTTAGAAGACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTAC 2774341 Query 118828 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 118887 | || |||||||| | |||| | || || || ||||| || |||| || | ||| || | Sbjct 2774342 AGGCGTCCTTGTACAACATGAAAGGAGTACCGGTCTCAGTCTGGGCCTCCAAAATGGCGT 2774401 Query 118888 TCCA-GACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTG 118946 ||| || | | || | |||||| | ||| || ||| |||||| | | Sbjct 2774402 ACCACAACTTTTGGGCCTTG-ACAGTGTTTCTTCCTCTACCTTCTCTCTCGTAACGTTCG 2774460 Query 118947 TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 119006 || | |||| || || ||||| | |||| | ||||| || | | ||| || Sbjct 2774461 TACAACTCTTCGAATTCGTCACCGTATACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAG 2774520 Query 119007 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 119066 || |||| ||| | ||| | || || | ||||||||| | |||||| ||||| | Sbjct 2774521 AAAAGAGTCCAATCACCGTTTTGTTCGACTCTCTTCATGAACAAGTCTGGAATCCACAAA 2774580 Query 119067 GCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 119126 || | ||| | ||| | | | | ||||| | || || || | | || | Sbjct 2774581 GCTGGGAACAAATCTCTAGCTCTAATCTCTTCCTTACCGTGGTTCTTTCTGATATCAATG 2774640 Query 119127 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG- 119185 ||||| | || || |||||||| ||||||| ||| | || | | | ||| |||| Sbjct 2774641 AAGTCGAAAATGTCTGCGTGCCATGGTTCCAAGTATAAGGCAAAAG-CACCT--GGACGC 2774697 Query 119186 -----ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATG 119240 |||| | |||| || || || ||||| || || ||||||| |||||||||| Sbjct 2774698 TTGTTACCACCTTGGTCAACGTATCTAGCAGTATTATTGAAGACACGAACCATTGGAATG 2774757 Query 119241 ATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGG 119300 ||||| | |||| || || || || ||| | | | | | | | |||| Sbjct 2774758 ATACCGTTGGATGTACCGTTAGTACCAGCAATGTAGGCACCAGTAGAACGAATGTTGTGG 2774817 Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360 ||||| | ||||||||| || || | ||| || || || || | | | | || || Sbjct 2774818 ATGTGTAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTTAAAGTGTCG 2774877 Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420 || || || || || ||||| |||| | |||| ||||| || |||||||| || Sbjct 2774878 TAAATTCCGTCAATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGA 2774937 Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATC 119480 || |||||||||||||| | |||||| | |||| |||| | || |||||||||| Sbjct 2774938 GATGGGGTACCAGCGTTGAACAAAGTTGGAGAACCGTGAGTGAAGAAACGTTGGGACATC 2774997 Query 119481 TTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGC 119540 || ||| | || | ||| || || || ||||| ||||| || || || | | Sbjct 2774998 AAGTTGTAAGATTCAATGACCTTCTCGATATCATCACCGTGGATACCAATAGAAACTCTC 2775057 Query 119541 ATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTC 119600 |||| || | ||| ||| |||| | |||| | || | ||||| || Sbjct 2775058 ATAATCAAATGTTGTGGTCTTTCAGCAACCTTACCGTTGACACGTAAAAGGTATGATCTC 2775117 Query 119601 TCCAAGGTCTTGAGACCAAAATAGCCAAAATCGTAGTCCCGCTTCGT-GACGATG 119654 || |||||||||| |||||| ||| | ||| | |||| || |||| ||||||| Sbjct 2775118 TCTAAGGTCTTGAAACCAAAGTAGTTATAATTGAAGTCACG-ATCGTAGACGATG 2775171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435122695600