Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2 269 3e-67 seq3 89.7 6e-13 >seq2 Length=3116340 Score = 269 bits (298), Expect = 3e-67 Identities = 1162/1808 (64%), Gaps = 43/1808 (2%) Strand=Plus/Minus Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGTGTC-TTGA 104213 || |||||| |||| ||| | |||| || | || ||| ||| || | ||| ||| Sbjct 2775140 TACTTTGGTTTCAAGACCTTAGAGA-GATCATACCTTTTACGTGTCAACGGTAAGGTTGC 2775082 Query 104214 TGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTG 104273 || ||| ||||| | || | ||| | || | || ||||| || || || || || | Sbjct 2775081 TG-AAAGACCACAACATTTGATTATGAGAGTTTCTATTGGTATCCACGGTGATGATATCG 2775023 Query 104274 ATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAA 104333 | ||| | || | ||| || |||||||||| || | |||| ||||| | |||| Sbjct 2775022 AGAAGGTCATTGAATCTTACAACTTGATGTCCCAACGTTTCTTCACTCACGGTTCTCCAA 2774963 Query 104334 CCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACA 104393 | | ||||| |||||||| ||| || |||||||| ||| |||||| |||||| | Sbjct 2774962 CTTTGTTCAACGCTGGTACCCCATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCCATGA 2774903 Query 104394 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 104453 |||| ||||| || |||| || || | ||| | | | ||||| || || ||| Sbjct 2774902 AGGACGACTCTATTGACGGAATTTACGACACTTTAAAGACCTGTGCCTTGATTTCCAAGA 2774843 Query 104454 GGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 104513 | ||||| |||||||| | |||||||| | | | | | | | ||| | Sbjct 2774842 GTGCTGGTGGTATTGGTTTACACATCCACAACATTCGTTCTACTGGTGCCTACATTGCTG 2774783 Query 104514 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 104573 | || || ||| ||| | ||||| ||||||||| |||| || || || || || Sbjct 2774782 GTACTAACGGTACATCCAACGGTATCATTCCAATGGTTCGTGTCTTCAATAATACTGCTA 2774723 Query 104574 GCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGC 104627 | || || | |||| ||| ||||| | || || | || | || | || | Sbjct 2774722 GATACGTTGACCAAGGTGGTAACAAGCGTCCA---GGTGCTTTTGCCTTATACTTGGAAC 2774666 Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687 |||||||||| || || | || ||| |||| | | ||||| ||| | || ||| Sbjct 2774665 CATGGCACGCAGACATTTTCGACTTCATTGATATCAGAAAGAACCACGGTAAGGAAGAGA 2774606 Query 104688 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747 | | ||| | ||| | ||| | ||||||||||| | |||||||||||||| | Sbjct 2774605 TTAGAGCTAGAGATTTGTTCCCAGCTTTGTGGATTCCAGACTTGTTCATGAAGAGAGTCG 2774546 Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807 | | | || ||||| |||| || | |||| || | || || || | | || | Sbjct 2774545 AACAAAACGGTGATTGGACTCTTTTCTCTCCAAACGAAGCTCCAGGCTTGCCAGAAGTAT 2774486 Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGA 104867 ||||| || || |||| | ||| | |||||| ||||||| | | | | Sbjct 2774485 ACGGTGACGAATTCGAAGAGTTGTACGAACGTTACGAGAGAGAAGGTAGAGGAAGAAACA 2774426 Query 104868 CGGTGCCAGCTGCCGATGT-GTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 | || | || | | || |||| | || ||| | || | || || ||||| ||||| Sbjct 2774425 CTGT-CAAGGCCCAAAAGTTGTGGTACGCCATTTTGGAGGCCCAGACTGAGACCGGTACT 2774367 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || | |||| | ||||| |||||||||||| | |||| || |||||||| |||||| | Sbjct 2774366 CCTTTCATGTTGTACAAGGACGCCTGTAACAAGAAGACCAACCAAAAGAACTTGGGTATA 2774307 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046 |||||| ||| || | ||| |||||| | || | | | ||| || ||| Sbjct 2774306 ATCAAGTCTTCTAACTTGTGTTGTGAAATCGTAGAGTACTCTTCCCCAGAGGAAGTTGCT 2774247 Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT- 105105 || |||||| | || || || ||| | || | || || || | ||| | || Sbjct 2774246 GTCTGTAACTTGGCCTCCATTGCTTTACCTTCCTTTGCTGAGAAGGACAGCAAGTCTTTG 2774187 Query 105106 TGAT-----TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160 || | | ||| || | |||||||| || || | ||||| ||| | |||| Sbjct 2774186 TGGTACAACTTTGAGAAGTTGCACGAAGTCACCAAGTCCGTCACTCGTAACTTGAACAAG 2774127 Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220 | ||||| ||||| | ||||| ||| | ||| | |||||| | |||| || | Sbjct 2774126 ATCATTGACAGAAACTACTACCCAGTTCCGGAAGCTGAGAGATCTAACAAGAGAAACAGA 2774067 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATT 105279 ||||||| | | ||||| || ||| | || ||| ||||| | ||| || |||| Sbjct 2774066 CCAATTGCTTTGGGTGTCCAAGGTTTGGCTGATACCTTCATGGCATTGAGATTAC-CATT 2774008 Query 105280 TGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGC 105339 || ||| | || || | ||| | || | || ||||| || || ||||||| || Sbjct 2774007 CGACTCCCAAGAGGCTAGAGAATTGAACATCCAAATCTTTGAAACTATCTATCACGGTGC 2773948 Query 105340 TCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 |||| || | || ||||| | | || || || || || | | ||||| || Sbjct 2773947 CGTTGAAGCCTCTATCGAATTGGCTGCCGAAGAAGGCCCTTACGAGTCTTACGAGGGCTC 2773888 Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA 105459 ||||||||| ||||| || | |||| ||| ||||||| | || |||| || || Sbjct 2773887 TCCAGCTTCCCAAGGATTGTTACAATATGACTTGTGGGACAGAAAG-CCAA-CTGAGTTA 2773830 Query 105460 CG--ACTGGGAAGCTCTCAAG--GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 | ||||||| | | ||| ||| | | || | ||| | | || | | Sbjct 2773829 TGGGACTGGGATTCCTTGAAGCAGAAGTTGGCTA--AGCACGGTTTGAGAAATTCTTTGT 2773772 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575 | | || ||||||||||| ||||| || | |||||||||||||| || ||||| |||| Sbjct 2773771 TGGTCGCCCCAATGCCAACTGCCTCAACTTCCCAAATCTTGGGTAACAACGAATGTTTTG 2773712 Query 105576 AACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTC 105634 |||| ||||| | |||||||| ||| |||||| | || || || ||| ||||||| Sbjct 2773711 AACCATACACATCTAACATCTACTCT-AGAAGAGTGTTGGCTGGTGAATTTCAGATTGTC 2773653 Query 105635 AACAAGCAT-CTCG-TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGG 105692 ||| ||| || | || ||| | || | ||| ||||| | | | |||||| Sbjct 2773652 AAC--CCATACTTGTTGCGTGATTTGGTCGACTTGGGTATCTGGAACGATGCCATGAAGA 2773595 Query 105693 ATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTG-TGGATATTCCAAATGAAATT 105751 | ||| | |||||| | || | |||| || ||||| |||| || Sbjct 2773594 ACAACATCATTTCTAACAATGGTTCTA-TCCAGTCATTGCCTAATGTTCCAGATGAGCTT 2773536 Query 105752 AAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCA 105811 ||| || || || |||||||||||| ||| || | ||||||||||| || Sbjct 2773535 AAGGCCTTATATAAGACTGTTTGGGAAATCTCACAAAAGCATATTATTGACATGGCTGCT 2773476 Query 105812 GATCGTGGTCGCTTCATTGATCAAAGTCAAAG--TATGAATCTCTTCATGGAAAGTCCAA 105869 || | | | ||||||||| | ||||| || | |||| || ||| | |||| Sbjct 2773475 GACAGAGCTGCCTTCATTGACC--AGTCACAGTCTTTGAACATCCACATCAAGGACCCAA 2773418 Query 105870 CGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGA 105929 | ||| ||||| | |||||||| | ||| |||||||||||||| | || || || | Sbjct 2773417 CAATGGGTAAGCTTACCTCTATGCATTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGTA 2773358 Query 105930 TGTATTAC 105937 |||||||| Sbjct 2773357 TGTATTAC 2773350 >seq3 Length=2759450 Score = 89.7 bits (98), Expect = 6e-13 Identities = 120/165 (73%), Gaps = 4/165 (2%) Strand=Plus/Plus Query 154115 GTTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTAT--CCAAGTTGGTGCGGGTGTTG 154172 || || ||| |||||||| | || | ||||| ||||| ||| |||||| ||||||| Sbjct 260325 GTCGCCCCAAGATCTGGTTTGGCCGCAAAACACGGTATTTCCAC--TGGTGCTGGTGTTG 260382 Query 154173 TTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGACAAAGACT 154232 | ||| | ||||||| || || ||||| || |||||||||| ||| |||||||||| Sbjct 260383 TGGATGCTGACTACAGAGGAGAGGTCAAGGTTATTCTTTTCAACCACTCCGACAAAGACT 260442 Query 154233 TTGAGGTAAAGAGGGGTGAGCGCATCGCACAACTTGTTCTTGAGA 154277 ||| || ||| ||| || | || || ||| | || | |||| Sbjct 260443 TTGCTGTCGAGAAGGGGGATAGAATTGCCCAATTAGTGTTGGAGA 260487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260727092400