Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2 190 2e-43 >seq2 Length=3116340 Score = 190 bits (210), Expect = 2e-43 Identities = 1085/1721 (63%), Gaps = 53/1721 (3%) Strand=Plus/Plus Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247 |||||| || || ||||| || ||||| | |||||||||||| ||||| | |||||| Sbjct 2773340 GTGTTCTTAAGTAATACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAG 2773399 Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307 | ||||| ||| | |||| || ||| |||||| | ||||| |||||||| | Sbjct 2773400 AGGTAAGCTTACCCATTGTTGGGTCCTTGATGTGGATGTTCAAAGACTGTGACTGGTCAA 2773459 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 || | ||| | | ||| || |||||||| || | |||||| | || ||||| | | Sbjct 2773460 TGAAGGCAGCTCTGTCAGCAGCCATGTCAATAATATGCTTTTGTGAGATTTCCCAAACAG 2773519 Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGA----TGTCCAGCGCTTGTACGCTCCCACCG 78423 || || | |||||| ||||| || |||| | || | || | ||| | Sbjct 2773520 TCTTATATAAGGCCTTAAGCTCATC-TGGAACATTAGGCAATGACTGGATAGAACCATTG 2773578 Query 78424 GCTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGG 78483 | || | ||||| || | ||||||| | | | | ||| || Sbjct 2773579 TTAGAAATGATGTTGTTCTTCATGGCATCGTTCCAGATACCCAAGTCGACCAAATCACGC 2773638 Query 78484 ACCAGGTGCCGGTT---AATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATG 78540 | || || |||| |||| ||| || || || |||| | | ||||||| Sbjct 2773639 AACAAGTATGGGTTGACAATC-TGA--AATTCACCAGCCAACACTCTTCTAGAGTAGATG 2773695 Query 78541 TTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTC 78600 || | ||||| || || ||| |||||||| |||| ||| |||| || ||||| || Sbjct 2773696 TTAGATGTGTATGGTTCAAAACATTCGTTGTTACCCAAGATTTGGGAAGTTGAGGCAGTT 2773755 Query 78601 GGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGG 78660 ||||| || ||||||| | |||||| | | ||| ||| | | || ||| | | Sbjct 2773756 GGCATTGGGGCGACCAACAAAGAATTTCTCAAACCGTGCTTAGCCAACTTCTGCTTCAAG 2773815 Query 78661 ------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCC 78714 | |||||| || ||| | | | | |||||| ||| ||| | | || Sbjct 2773816 GAATCCCAGTCCCATAACTCAGTTGGCTTTCTGTCCCACAAGTCATATTGTAACAATCCT 2773875 Query 78715 TCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCAT 78774 | ||| || || || |||| | | | |||||||| || || || || | |||| Sbjct 2773876 TGGGAAGCTGGAGAGCCCTCGTAAGACTCGTAAGGGCCTTCTTCGGCAGCCAATTCGATA 2773935 Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 || | | ||| |||| || | || || ||||| |||| | || | ||| Sbjct 2773936 GAGGCTTCAACGGCACCGTGATAGATAGTTTCAAAGATTTGGATGTTCAATTCTCTAGCC 2773995 Query 78835 T--TGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGC 78892 | ||| |||||| | | | | ||||||| ||| |||| || ||||| | Sbjct 2773996 TCTTGGGA--GTCGAATGGTAATCTCAATGCCATGAAGGTATCAGCCAAACCTTGGACAC 2774053 Query 78893 CGATAGCGATCGGTCGGTGGCGCATGTT-GCTCTTTCGGGCCGCCTCGGTCGGGTAAAAG 78951 | | ||| || |||| || | | |||| | ||| || | | || ||||| || Sbjct 2774054 CCAAAGCAATTGGTCTGTTTCTCTTGTTAGATCTCTCAG-CTTCCGGAACTGGGTAGTAG 2774112 Query 78952 TTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTG 79011 || | || |||| ||||| |||||| |||||| | || || |||| ||| || Sbjct 2774113 TTTCTGTCAATGATCTTGTTCAAGTTACGAGTGACGGACTTGGTGACTTCGTGCAACTTC 2774172 Query 79012 GCGAAAT-------CAAAA---TGATTTCCTT-TGATGAAAGTCGGTAGGCACAGCGATG 79060 | || | |||| || | ||||| | | |||| | ||| | ||| ||| Sbjct 2774173 TCAAAGTTGTACCACAAAGACTTGCTGTCCTTCTCAGCAAAG---GAAGGTAAAGCAATG 2774229 Query 79061 ----CCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116 ||| ||| || || || || || ||| ||| ||| | |||||| ||| Sbjct 2774230 GAGGCCAAGTTACAGACAGCAACTTCCTCTGGGGAAGAGTACTCTACGATTTCACAACAC 2774289 Query 79117 AAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176 || ||||| |||||||| | || | |||||| |||||| |||||| ||||||||||||| Sbjct 2774290 AAGTTAGAAGACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCGTCC 2774349 Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATG 79236 ||||| ||||| | || || ||||||||| ||| || | || | ||| ||| | Sbjct 2774350 TTGTACAACATGAAAGGAGTACCGGTCTCAGTCTGGGCCTCCAAAATGGCGTACCACAAC 2774409 Query 79237 TCCCGGGCCCGGACA----ACCTTCTTGTACCGACCCTGTGCGACGT-ACGTCCGGTACA 79291 | ||||| |||| |||| | |||| | || | ||| |||| | ||||| Sbjct 2774410 TTTTGGGCCTTGACAGTGTTTCTTCCTCTACCTTCTCTCT----CGTAACGTTC-GTACA 2774464 Query 79292 ACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCA 79351 |||| | ||| | || || || || || |||| ||| || |||| || | | | Sbjct 2774465 ACTCTTCGAATTCGTCACCGTATACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAA 2774524 Query 79352 GGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCG 79411 | ||| || ||| | || || ||| |||||| | ||| || ||||||| || | Sbjct 2774525 GAGTCCAATCACCGTTTTGTTCGACTCTCTTCATGAACAAGTCTGGAATCCACAAAGCTG 2774584 Query 79412 TGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGT 79471 ||| | || | | ||||| || | || |||||| | | || | |||| Sbjct 2774585 GGAACAAATCTCTAGCTCTAATCTCTTCCTTACCGTGGTTCTTTCTGATATCAATGAAGT 2774644 Query 79472 CCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGC 79531 | | ||||| |||||||| || |||| || | ||| || | ||| |||||| | Sbjct 2774645 CGAAAATGTCTGCGTGCCATGGTTCCAAGTATAAGGCAAAAGCACCTGGACGCTTGTTAC 2774704 Query 79532 CGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGT 79591 | || |||| ||||| | || || || ||||| || || | ||| || | ||| |||| Sbjct 2774705 CACCTTGGTCAACGTATCTAGCAGTATTATTGAAGACACGAACCATTGGAATGATACCGT 2774764 Query 79592 CGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGA 79651 || ||||| || || || | ||| | | |||||||| | ||| | Sbjct 2774765 TGGATGTACCGTTAGTACCAGCAATGTAGGCACCAGTAGAACGAATGTTGTGGATGTGTA 2774824 Query 79652 TTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGC 79711 || || || || | | |||||| || || || ||| | || ||||| || | Sbjct 2774825 AACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTTAAAGTGTCGTAAATTC 2774884 Query 79712 CCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGG-GTTGTTC 79770 | || || |||||||||||||| ||||| ||||| || ||||| ||||| | || Sbjct 2774885 CGTCAATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGAGATG-GG 2774943 Query 79771 GTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCG 79830 ||||| |||||||| | || || | |||| |||||||| |||| ||||| | | Sbjct 2774944 GTACCAGCGTTGAACAAAGTTGGAGAACCGTGAGTGAAGAAACGTTGGGACATCAAGTTG 2775003 Query 79831 TACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCC 79871 || | || |||| | || || || |||||||| || Sbjct 2775004 TAAGATTCAATGACCTTCTCGATATCATCACCGTGGATACC 2775044 Score = 150 bits (166), Expect = 2e-31 Identities = 485/743 (65%), Gaps = 16/743 (2%) Strand=Plus/Minus Query 19172 TACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGT 19231 ||| || ||||| ||| |||||||| |||| | || || | |||||||| ||| Sbjct 2775005 TACAACTTGATGTCCCAACGTTTCTTCACTCACGGTTCTCCAACTTTGTTCAACGCTGGT 2774946 Query 19232 ACGAACAAC-CCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGA 19290 || || | || || ||||| |||||||| || || |||||||| ||| ||||| Sbjct 2774945 ACCC-CATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCCATGAAGGACGACTCTATTGA 2774887 Query 19291 GGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGG 19350 || || ||||| || | ||| || || || |||||| | | || ||||| || Sbjct 2774886 CGGAATTTACGACACTTTAAAGACCTGTGCCTTGATTTCCAAGAGTGCTGGTGGTATTGG 2774827 Query 19351 GATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGC 19410 | ||| | || || || || | |||| | || ||| || ||||| | | Sbjct 2774826 TTTACACATCCACAACATTCGTTCTACTGGTGCCTACATTGCTGGTACTAACGGTACATC 2774767 Query 19411 CGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGG 19470 | |||||||| | |||||| | || |||||||| || || || || ||||| |||| || Sbjct 2774766 CAACGGTATCATTCCAATGGTTCGTGTCTTCAATAATACTGCTAGATACGTTGACCAAGG 2774707 Query 19471 GGGCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTC 19528 || ||| || || | ||| || ||| | ||| | || ||||||||||| ||| | Sbjct 2774706 TGGTAACAAGCGTCCAGGTGCT--TTTGCCTTATACTTGGAACCATGGCACGCAGACATT 2774649 Query 19529 ATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTC 19588 | || ||| | || | | |||||| ||| | || ||||| | | | || | Sbjct 2774648 TTCGACTTCATTGATATCAGAAAGAACCACGGTAAGGAAGAGATTAGAGCTAGAGATTTG 2774589 Query 19589 TTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGG 19648 ||| | || ||||||||||| ||| | |||||| ||| || || | ||| || ||| Sbjct 2774588 TTCCCAGCTTTGTGGATTCCAGACTTGTTCATGAAGAGAGTCGAACAAAACGGTGATTGG 2774529 Query 19649 CACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAAT 19708 || | | || ||||| || ||| | || || || ||||| || | ||| | Sbjct 2774528 ACTCTTTTCTCTCCAAACGAAGCTCCAGGCTTGCCAGAAGTATACGGTGACGAATTCGAA 2774469 Query 19709 GAGTTGTACCGGAC-TTACGTAGCCCAGGGCCGGTTCAAGAAG----GTGGTCCGGGCCC 19763 |||||||| || || ||||| || || | ||| | |||| ||| ||||| Sbjct 2774468 GAGTTGTA-CGAACGTTACG-AG---AGAGAAGGTAGAGGAAGAAACACTGTCAAGGCCC 2774414 Query 19764 GGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCT 19823 | | ||| || | | | | |||| |||||||| || || | ||||| | Sbjct 2774413 AAAAGTTGTGGTACGCCATTTTGGAGGCCCAGACTGAGACCGGTACTCCTTTCATGTTGT 2774354 Query 19824 ACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCA 19883 ||||||||||| ||| ||| | || || |||||| | || |||||||| || | Sbjct 2774353 ACAAGGACGCCTGTAACAAGAAGACCAACCAAAAGAACTTGGGTATAATCAAGTCTTCTA 2774294 Query 19884 ACCTGTGTACTGAAATCATGGAG 19906 || ||||| ||||||| | ||| Sbjct 2774293 ACTTGTGTTGTGAAATCGTAGAG 2774271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524731434400