Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2 161 1e-34 >seq2 Length=3116340 Score = 161 bits (178), Expect = 1e-34 Identities = 504/768 (66%), Gaps = 18/768 (2%) Strand=Plus/Minus Query 53210 GGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAG 53269 |||||||||||||| || | | ||| ||| | ||| |||| ||| |||| Sbjct 2775044 GGTATCCACGGTGATGATATCGAGAAGGTCATTGAATCTTACAACTTGATGTCCCAACGT 2774985 Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA-CGAATCACCCTCAGATGTC 53328 | ||| || |||| | ||||| ||||||||||||||| | ||| || || ||||| Sbjct 2774984 TTCTTCACTCACGGTTCTCCAACTTTGTTCAACGCTGGTACCCCATC-TCCACAAATGTC 2774926 Query 53329 GAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAA 53388 || ||||| || || |||||||| ||||| || ||||| || ||||| || | || Sbjct 2774925 TTCTTGTTTCCTTGTCGCCATGAAGGACGACTCTATTGACGGAATTTACGACACTTTAAA 2774866 Query 53389 GGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGTCCG 53448 | |||||| || |||||| | | |||||||| ||| | ||| | ||| | || Sbjct 2774865 GACCTGTGCCTTGATTTCCAAGAGTGCTGGTGGTATTGGTTTACACATCCACAACATTCG 2774806 Query 53449 TGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCT 53508 | | | || | || || || ||||| || | || ||| | || ||| | Sbjct 2774805 TTCTACTGGTGCCTACATTGCTGGTACTAACGGTACATCCAACGGTATCATTCCAATGGT 2774746 Query 53509 CCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGGGGT 53567 || |||||||| || || || | ||||| |||| |||||| ||||| | ||| | Sbjct 2774745 TCGTGTCTTCAATAATACTGCTAGATACGTTGACCAAGGTGGTAACAAGCGTCCAGGTG- 2774687 Query 53568 CGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTC 53627 | || ||| | ||| | || || |||||||| |||||| | || || | || | | Sbjct 2774686 CTTTTGCCTTATACTTGGAACCATGGCACGCAGACATTTTCGACTTCATTGATATCAGAA 2774627 Query 53628 TGAATCAGGGTGACGAAGAGAT--GCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCC 53685 ||| || ||| | |||||||| | ||| | || |||| ||||| |||||||||| Sbjct 2774626 AGAACCACGGTAAGGAAGAGATTAGAGCT--AGAGATTTGTTCCCAGCTTTGTGGATTCC 2774569 Query 53686 GGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGA 53745 ||| | |||||| | | || || | ||| || ||| || | | || ||||| Sbjct 2774568 AGACTTGTTCATGAAGAGAGTCGAACAAAACGGTGATTGGACTCTTTTCTCTCCAAACGA 2774509 Query 53746 GTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACG-TACG 53804 || ||| | | | || |||||||| || || | ||| |||| || ||| |||| Sbjct 2774508 AGCTCCAGGCTTGCCAGAAGTATACGGTGACGAATTCGAAGAGTTGTA-CGAACGTTACG 2774450 Query 53805 CAGTTCAGGGCCGCTACAAGAAGAA----GGTCAAGGCGCGTGAGGTATGGGATGCAATC 53860 || || | | || | |||||| |||||||| | || | ||| | || || Sbjct 2774449 -AG---AGAGAAGGTAGAGGAAGAAACACTGTCAAGGCCCAAAAGTTGTGGTACGCCATT 2774394 Query 53861 CTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAG 53920 | || |||| ||||| || || || | ||||| |||||||| | ||| || Sbjct 2774393 TTGGAGGCCCAGACTGAGACCGGTACTCCTTTCATGTTGTACAAGGACGCCTGTAACAAG 2774334 Query 53921 AAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGCAACTTATGT 53968 |||| |||||| |||||| | || | ||||| || ||||| ||| Sbjct 2774333 AAGACCAACCAAAAGAACTTGGGTATAATCAAGTCTTCTAACTTGTGT 2774286 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 55744 GACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTA 55803 ||| || ||||| || |||| ||| | | ||||||||| |||||| | | ||| | Sbjct 2773521 GACTGTTTGGGAAATCTCACAAAAGCATATTATTGACATGGCTGCTGACAGAGCTGCCTT 2773462 Query 55804 CATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAG 55863 ||| |||||||| |||||| |||||||| ||| || | || || ||| ||| | | Sbjct 2773461 CATTGACCAGTCACAGTCTTTGAACATCCACATCAAGGACCCAACAATGGGTAAGCTTAC 2773402 Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTA 55914 ||| ||||| || ||||| ||||||||||| | ||||| |||||||| || Sbjct 2773401 CTCTATGCATTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGTATGTATTA 2773351 Score = 93.3 bits (102), Expect = 5e-14 Identities = 272/412 (66%), Gaps = 9/412 (2%) Strand=Plus/Plus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 ||||| ||||| | |||||||| || || || | | || ||||| | || | |||| Sbjct 2726461 CCTTCGTCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCTGGCATTAAACCTCTCTTC 2726520 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 |||||||| ||||| | | |||||| |||||||| ||||| || || ||| || || Sbjct 2726521 TTCAACCAGAAGATAGAAGCGAAGGATCCACTGAAAAAGATACCCTCAACAGCAGCGAAA 2726580 Query 74889 GCGACAAGGCGTTGCGCGAAC---GGTGCATCGGAAGTCATCCAAGTCTGAGCCCATTCA 74945 || || | | | ||||| | | ||||| || ||||| || ||||| ||| Sbjct 2726581 GCTACTAATCTCTCACCGAACAAGGCTTCATCGTCAGAGATCCATCTCAAGGCCCAGTCA 2726640 Query 74946 GCTTTTCGTTTGACCGCAGGGACAG-TATCGATCGCTTGGAAGAGG--CTTGCCTTCTCT 75002 || || | ||| || ||| | | ||||| || | ||| ||| | | |||| || Sbjct 2726641 GCCTTCTTTCTGA-TACATGGAATGTTGTCGATGGCGTTGAAAAGGAAGTCGGCTTC-CT 2726698 Query 75003 TCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCG 75062 | ||| ||||| ||| ||||||| | | ||||| ||||| || ||||| || Sbjct 2726699 TAGGG-TCCTTAACGTAAGTGTCAATTAATAAAGAGTATGTCTCAGAGTGAATGTTTTCC 2726757 Query 75063 TTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAA 75122 | | ||| | |||||||| || || |||| || || || || || || Sbjct 2726758 ATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTGGACTTCAGCAGAGAAG 2726817 Query 75123 TTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCA 75174 ||| | | ||||| |||| || || || ||||||||||| ||||||| Sbjct 2726818 TTCTCAACCAAGTTCTCGTTGACAATACCATCAGAGGCGGCGAAGAAAGCCA 2726869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215931598000