Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq8 154 2e-32 seq2 145 9e-30 seq6 114 1e-20 >seq8 Length=506948 Score = 154 bits (170), Expect = 2e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | || || ||||||||||||||||| || || || | Sbjct 221742 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTCGAATCTTCT 221801 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || || || |||||||| || ||||| |||||||| Sbjct 221802 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 221861 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| |||| || |||||||||||| | || || | | | || || | ||||| || Sbjct 221862 CAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCCGACTACAAC 221921 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||||||||||||||||||||| Sbjct 221922 ATCCAAAAGGAATCCACTCTTCA 221944 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | || || ||||||||||||||||| ||||| || | Sbjct 221970 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTTGAATCTTCT 222029 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || || || |||||||| || ||||| |||||||| Sbjct 222030 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222089 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||||||| | || || | | ||| || | ||||| || Sbjct 222090 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACCTTATCTGACTACAAC 222149 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||||||||||||||||||||| Sbjct 222150 ATCCAAAAGGAATCCACTCTTCA 222172 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | || || ||||||||||||||||| || ||||| | Sbjct 222198 ATGCAAATTTTCGTCAAGACCTTGACTGGTAAGACTATTACTCTTGAAGTCGAGTCCTCT 222257 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || || || |||||||| || ||||| |||||||| Sbjct 222258 GACACTATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222317 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||| || ||||||||| | || || | | ||| || | ||||| || Sbjct 222318 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGCAGAACCTTATCTGACTACAAC 222377 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||||||||||||||||||||| Sbjct 222378 ATCCAAAAGGAATCCACTCTTCA 222400 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | ||||| |||||||| || || || |||||||| | Sbjct 222426 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATCACCCTCGAAGTTGAGTCCTCT 222485 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || || || |||||||| || ||||| |||||||| Sbjct 222486 GACACTATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222545 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||||||| | || || | | | || || | ||||| || Sbjct 222546 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 222605 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||||||||||||||||||||| Sbjct 222606 ATCCAAAAGGAATCCACTCTTCA 222628 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| | ||||| ||||| ||||| | || ||||| || | Sbjct 221514 ATGCAAATCTTCGTTAAGACATTGACCGGTAAGACCATTACCTTGGAAGTTGAATCTTCT 221573 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || || || || ||||| || ||||| |||||||| Sbjct 221574 GACACTATTGACAACGTCAAGTCCAAGATCCAAGATAAGGAAGGTATTCCACCAGACCAA 221633 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| |||| || |||||||||||| | || || | | | || || | ||||| || Sbjct 221634 CAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCCGACTACAAC 221693 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||||||||||||||||||||| Sbjct 221694 ATCCAAAAGGAATCCACTCTTCA 221716 >seq2 Length=3116340 Score = 145 bits (160), Expect = 9e-30 Identities = 1093/1742 (63%), Gaps = 77/1742 (4%) Strand=Plus/Plus Query 80047 TAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTC 80106 || ||||| || ||||| | ||||||||||| ||||| | |||||||| | ||||| Sbjct 2773351 TAATACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTA 2773410 Query 80107 GCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCA 80166 | | ||| |||| || ||| |||||||| |||||| ||||| ||||| || | Sbjct 2773411 CCCATTGTTGGGTCCTTGATGTGGATGTTCAAAGACTGTGACTGGTCAATGAAGGCAGCT 2773470 Query 80167 CGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGATACA-- 80224 | || || ||||| |||||||| |||||||| |||||||| || || ||| | Sbjct 2773471 CTGTCAGCAGCCATGTCAATAATATGCTTTTGTGAGATTTCCCAAACAGTCTTATATAAG 2773530 Query 80225 -CCTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCA--CACTG----CCACCGTCCTTT 80277 |||| |||||| |||||| | ||| ||| |||| ||| | || Sbjct 2773531 GCCTT---AAGCTCATCTGGA------ACATTAGGCAATGACTGGATAGAACCATTGTTA 2773581 Query 80278 ACAAT----TTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTTC-A 80332 ||| ||| || |||| || |||||| ||| | | | || ||| | | Sbjct 2773582 GAAATGATGTTG-TTCTTCATGGCATCGTTCCAGATACCCAAGTCGACCAAATCACGCAA 2773640 Query 80333 CAAG--GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGA-TACAGGT 80389 |||| | ||| |||| || ||| || || || | | | ||| || | || Sbjct 2773641 CAAGTATGGGTTGACAATC-TG--AAATTCACCAGCCAACACTCTTC-TAGAGTAGATGT 2773696 Query 80390 TTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCG 80449 | | ||||| || ||||| |||||||| || | ||| || | || || || | Sbjct 2773697 TAGATGTGTATGGTTCAAAACATTCGTTGTTACCCAAGATTTGGGAAGTTGAGGCAGTTG 2773756 Query 80450 GCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCA--- 80506 |||| ||| ||||||||| ||||| | || |||||||| | | || || Sbjct 2773757 GCATTGGGGCGACCAACAAAGAATTTCTCAAACCGTGCTTAGCCAACTTCTGCTTCAAGG 2773816 Query 80507 AATCTGA---CCAAAAATCAACCCCAACGCTGTGACCCCACATGTCGTGCTGCAAGATGC 80563 |||| | ||| || ||| |||| |||||| ||| | || || | | Sbjct 2773817 AATCCCAGTCCCATAACTCAGTTGGCTTTCTGT---CCCACAAGTCATATTGTAACAATC 2773873 Query 80564 CCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCAC 80623 | | || || ||||| ||| || | | |||||| ||| || |||| | |||| | Sbjct 2773874 CTTGGGAAGCTGGAGAGCCCTCGTAAGACTCGTAAGGG----CCTTCTTCGGCAGCCAAT 2773929 Query 80624 ACGA------CTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACAC 80677 ||| || | || ||| ||||||| || ||||||| |||||| Sbjct 2773930 TCGATAGAGGCTTC--AACGGCACCGTGATAGATAGTTTCAAAGATTTGGATGTTCAATT 2773987 Query 80678 CGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCT 80737 | | |||| | || |||||| | || | || |||||| ||||||| || | Sbjct 2773988 CTCTAGCCTCTTGGGAGTCGAATGGTAATCTCAATGCCATGAAGGTATCAGCCAAACCTT 2774047 Query 80738 GAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGT 80797 | || || | || || || | || | |||||| |||| ||| || ||||||| ||||| Sbjct 2774048 GGACACCCAAAGCAATTGGTCTGTTTCTCTTGTTAGATCTCTCAGCTTCCGGAACTGGGT 2774107 Query 80798 AAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAA 80857 | |||| | || |||| ||||| ||| || || || | || || || || | Sbjct 2774108 AGTAGTTTCTGTCAATGATCTTGTTCAAGTTACGAGTGACGGACTTGGTGACTTCGTGCA 2774167 Query 80858 GTTTCTGAAAGT----------CGAATTGGT-TCCCCTTCA-CAAATGCCGG-AAGGCTC 80904 |||| ||||| || ||| | ||| ||| |||| | || || || Sbjct 2774168 ACTTCTCAAAGTTGTACCACAAAGACTTGCTGTCCTTCTCAGCAAAGGAAGGTAAAGC-A 2774226 Query 80905 AGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTG 80964 | ||| |||| || || || || || || || | | |||| |||||||| Sbjct 2774227 ATGGAGGCCAAGTTACAGACAGCAACTTCCTCTGGGGAAGAGTACTCTACGATTTCACAA 2774286 Query 80965 CACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCG 81024 ||||| ||||||||||| ||| |||||| ||| || ||||| | ||| ||| || ||| Sbjct 2774287 CACAAGTTAGAAGACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCG 2774346 Query 81025 TCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAA 81084 |||||||| ||||| | || ||||||||||| ||| | || | ||||||| ||| Sbjct 2774347 TCCTTGTACAACATGAAAGGAGTACCGGTCTCAGTCTGGGCCTCCAAAATGGCGTACCAC 2774406 Query 81085 ATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCT 81144 | || | |||||||| || | | | ||||| | | || |||| Sbjct 2774407 AACTTTTGGGCCTTGACAGTGTTTCTTCCTCTACCTTCTCTCTCGTAACGTTCGTACAAC 2774466 Query 81145 TCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGG 81204 || ||||| | | |||||| | ||| | | | |||| ||||| || | | || Sbjct 2774467 TCTTCGAATTCGTCACCGTATACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGA 2774526 Query 81205 TGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTG 81264 ||| || || | || || ||||||||| ||| || ||||| | || | | Sbjct 2774527 GTCCAATCACCGTTTTGTTCGACTCTCTTCATGAACAAGTCTGGAATCCACAAAGCTGGG 2774586 Query 81265 AACAGGTCGCGGCAGCGC--GCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGT 81322 |||| || | ||| | ||| || | ||| ||||| | | || | |||| Sbjct 2774587 AACAAATCTC--TAGCTCTAATCTCTTCCTTACCGTGGTTCTTTCTGATATCAATGAAGT 2774644 Query 81323 CCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTG-CGACGG--- 81378 | | ||||| || |||||||| |||| || | ||| | | | ||| | || | Sbjct 2774645 CGAAAATGTCTGCGTGCCATGGTTCCAAGTATAAGGCAAAAG-CACCTGGACGCTTGTTA 2774703 Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438 ||||| |||| ||||| | ||||| || || ||||| | ||| || |||||||| Sbjct 2774704 CCACCTTGGTCAACGTATCTAGCAGTATTATTGAAGACACGAACCATTGGAATGATACCG 2774763 Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGA 81497 | || |||||| ||||| | || | || | | || | ||| ||| || Sbjct 2774764 TTGGATGTACCGTTAGTACCAGCAATGTAGGCACCAGTAGAACGAATGTTGTGGATGTGT 2774823 Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557 || ||| || ||||| | | ||| |||||| ||||| || | || || ||||| Sbjct 2774824 AA-ACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTTAAAGTGTCGTAAAT 2774882 Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617 ||| || || || | |||||| | | | |||||| ||||| || || | Sbjct 2774883 TCCGTCAATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGAGATGG 2774942 Query 81618 TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTC 81677 | || || ||||||| ||||| | ||||| |||| |||| | ||||||| || Sbjct 2774943 GGTACCAGCGTTGAACAAAGTTGGAGAACCGTGAGTGAAGAAACGTTGGGACATCAAGTT 2775002 Query 81678 ATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAA 81737 || | ||| |||| ||||| |||||||| ||||| |||| || | ||||| Sbjct 2775003 GTAAGATTCAATGACCTTCTCGATATCATCACCGTGGATACCAATAGAAACTCTCATAAT 2775062 Query 81738 CA 81739 || Sbjct 2775063 CA 2775064 >seq6 Length=1682205 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || |||||||| | || || ||||| ||||| | || || ||||| Sbjct 47115 AATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTGGAAGTCGAGTCCTC 47174 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| ||| | ||| | || |||||||||||||| || ||||| || ||||| Sbjct 47175 CGACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATTCCACCTGACCA 47234 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | || || ||||||||||| | || || | | | || || | ||||| || Sbjct 47235 ACAAAGATTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACTCTTTCTGACTACAA 47294 Query 27585 TGTCCAAAAGGAATCCAC 27602 |||| ||||||||||| Sbjct 47295 CATCCAGAAGGAATCCAC 47312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310328711200