Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq8 167 2e-36 >seq8 Length=506948 Score = 167 bits (184), Expect = 2e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| || ||| |||||||||||||||| ||| | || Sbjct 221742 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTCGAATCTTCT 221801 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| ||||| || ||||| || ||| Sbjct 221802 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 221861 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || |||||||| | ||| || || |||||||||||| || || ||||||| |||||| Sbjct 221862 CAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCCGACTACAAC 221921 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | || |||||||| | ||| | ||||| || Sbjct 221922 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGGTAT 221971 Score = 147 bits (162), Expect = 2e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || || ||||||| ||| | ||||| | ||||| ||| | || Sbjct 221513 CATGCAAATCTTCGTTAAGACATTGACCGGTAAGACCATTACCTTGGAAGTTGAATCTTC 221572 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | ||||| || || ||||| || ||||| || ||||| || || Sbjct 221573 TGACACTATTGACAACGTCAAGTCCAAGATCCAAGATAAGGAAGGTATTCCACCAGACCA 221632 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| |||||||| | ||| || || |||||||||||| || || ||||||| ||||| Sbjct 221633 ACAACGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCCGACTACAA 221692 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| |||||||| || || | || |||||||| | ||| | ||||| || Sbjct 221693 CATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGGTAT 221743 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| || ||| |||||||||||||||| ||| | || Sbjct 221970 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATTACTCTTGAAGTTGAATCTTCT 222029 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| ||||| || ||||| || ||| Sbjct 222030 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222089 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || |||||||||||| | ||| | || || |||||| Sbjct 222090 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACCTTATCTGACTACAAC 222149 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | || ||||| || | ||| | ||||| || Sbjct 222150 ATCCAAAAGGAATCCACTCTTCACTTGGTATTAAGATTGAGAGGTGGTAT 222199 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || |||| || ||| |||||||||||||||| || | || Sbjct 222198 ATGCAAATTTTCGTCAAGACCTTGACTGGTAAGACTATTACTCTTGAAGTCGAGTCCTCT 222257 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || |||||||| ||||| || ||||| || ||| Sbjct 222258 GACACTATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222317 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | |||||| || ||||| |||||| | ||| | || || |||||| Sbjct 222318 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGCAGAACCTTATCTGACTACAAC 222377 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | || |||||||| | ||| | ||||| || Sbjct 222378 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGGTAT 222427 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| ||||||| ||| |||| || || ||||| || | || Sbjct 222426 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATCACCCTCGAAGTTGAGTCCTCT 222485 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || |||||||| ||||| || ||||| || ||| Sbjct 222486 GACACTATTGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCAGACCAA 222545 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || |||||||||||| || || |||| || |||||| Sbjct 222546 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 222605 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || |||||||| || || | || ||||||||| | ||| | || || Sbjct 222606 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGAGG 222652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918345635200