Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 7e-11 >seq3 Length=2759450 Score = 82.4 bits (90), Expect = 7e-11 Identities = 198/297 (67%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381 || || || |||||||| | |||| ||||| || || |||||||| ||| || | Sbjct 1497919 GGTGTAAAAATCTGGGAAGGAAACGGATCTCGTGAATTCTTGGACAAGTTGGGATTGAC- 1497977 Query 34382 TCTCGGGAG-GAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440 | | | || || ||||| ||||| || || || || ||||| ||||| || || || || Sbjct 1497978 TGACCGTAGAGAAGGCGATTTGGGACCAGTTTATGGCTTCCAATGGAGGCATTTCGGAGC 1498037 Query 34441 GGAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGT 34500 || ||| || | || | || ||| | || | ||| |||||| ||||| | || Sbjct 1498038 AGAATATAAGGATTGTGACACAGATTATACCGGTAAAGGATTCGACCAGTTGCAGGATGT 1498097 Query 34501 GATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCC 34560 ||| | | || ||| ||||| | || ||||| || | |||| ||||||||||| Sbjct 1498098 CATCAAAAAGTTAAAGACAAACCCATACGATAGAAGAATTATTATGTCAGCGTGGAACCC 1498157 Query 34561 GAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617 ||| | |||||| | || || ||||| | |||||||||||||| Sbjct 1498158 TCCTGATTTTGGCAAGATGGCCTTGCCTCCATGCCATGTTTTTTGCCAATTCTACGT 1498214 Score = 82.4 bits (90), Expect = 7e-11 Identities = 198/297 (67%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 |||||||||||||| | ||||| || || | |||||| | ||| ||| Sbjct 1498214 ACGTAGAATTGGCAAAAAACATGGCATGGAGGCAAGGCCATCTTGCCAAAATCAGGAGGG 1498155 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847 |||||||| |||| | || ||||| || | ||||| ||| || | | ||| || Sbjct 1498154 TTCCACGCTGACATAATAATTCTTCTATCGTATGGGTTTGTCTTTAACTTTTTGATGACA 1498095 Query 6848 TACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCC 6907 | ||||| |||||| ||| | || | ||| || | || | || ||| || || Sbjct 1498094 TCCTGCAACTGGTCGAATCCTTTACCGGTATAATCTGTGTCACAATCCTTATATTCTGCT 1498035 Query 6908 CCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTC-CTCCCGAGATGG 6966 || || || ||||| ||||| || || || || ||||| ||||| || || | | | | Sbjct 1498034 CCGAAATGCCTCCATTGGAAGCCATAAACTGGTCCCAAATCGCCTTCTCTACGGTCA-GT 1497976 Query 6967 GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023 || ||| |||||||| || || ||||| |||| | |||||||| || || || Sbjct 1497975 CAATCCCAACTTGTCCAAGAATTCACGAGATCCGTTTCCTTCCCAGATTTTTACACC 1497919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262343967200